PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vang0013ss00970.1
Organism
Vigna angularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family WRKY
Protein Properties Length: 295aa    MW: 33075 Da    PI: 10.4781
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Vang0013ss00970.1genomeSNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY31.82.8e-10188208222
                        --SS-EEEEEEE--TT-SS-E CS
               WRKY   2 dDgynWrKYGqKevkgsefpr 22 
                        +D ++WrKYGqK++kgs++pr
  Vang0013ss00970.1 188 SDSWAWRKYGQKPIKGSPYPR 208
                        69******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF053402.0E-6648IPR008004Uncharacterised protein family UPF0503
Gene3DG3DSA:2.20.25.803.4E-9182208IPR003657WRKY domain
SuperFamilySSF1182901.31E-7185208IPR003657WRKY domain
SMARTSM007740.0025187230IPR003657WRKY domain
PROSITE profilePS5081112.553188224IPR003657WRKY domain
PfamPF031066.7E-6189208IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 295 aa     Download sequence    Send to blast
QQRSDCPACL CKRLVLLDPN NNNSLVTARK PPSTVAVAAL KALFRPRNPR RKRKLILDRL  60
IGACDEEIPL SSTVERRRPT AWLNSGLRQG MNGGLRQGLN DGLRRALMLG FGGEENLEAR  120
EANENRKSAR DSDMRYICIF QFLSYVDGGF AYHVALSVRR AIQKRVVQIP IKETEGCRLK  180
GESNTPPSDS WAWRKYGQKP IKGSPYPRLI PFPKRGTTGV AARRGARHGN KWKGAAWTPQ  240
WYHADVESAL LPMGEEDELL FADLGELPEC SVMFRQGLLA ERRRYTAPWC GTTS*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
14854PRRKRKL
Cis-element ? help Back to Top
SourceLink
PlantRegMapVang0013ss00970.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150661e-110AP015066.1 Vigna angularis var. angularis DNA, scaffold: Scaffold_0022, complete sequence, cultivar: Shumari.
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G29280.19e-21WRKY DNA-binding protein 65