PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vang0022ss04360.1
Organism
Vigna angularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family NAC
Protein Properties Length: 253aa    MW: 28797.8 Da    PI: 6.5626
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Vang0022ss04360.1genomeSNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM56.87.5e-181066150
                NAM  1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk........k 50
                       +ppGfrFhPtdeel+ +yL+kkv+ + ++l +vi+evd++k+ePwdL+         +
  Vang0022ss04360.1 10 VPPGFRFHPTDEELLYYYLRKKVSYEAIDL-DVIREVDLNKLEPWDLKVqmkpfiypC 66
                       69****************************.9***************84244444440 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019419.02E-17357IPR003441NAC domain
PROSITE profilePS5100512.57510176IPR003441NAC domain
PfamPF023652.4E-81183IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 253 aa     Download sequence    Send to blast
MMPSNGQLTV PPGFRFHPTD EELLYYYLRK KVSYEAIDLD VIREVDLNKL EPWDLKVQMK  60
PFIYPCLCTV ILSRQEDGWV VCRVFKKKNQ NRGFQQEIEE EENLTHMRTS GPCHVLEPKH  120
HMQGGLYDYN FDGTMQLPQL FSPESAAAPS SSCLGTSMNA MDILECSQNL LRLTTSGCGL  180
NLMQQQGERF SGDWSFLDKL LASHHAMDHQ HHPQSKCNPP THQAATSVAT SAQKFPFHYL  240
GCDTHDIMKF SK*
Cis-element ? help Back to Top
SourceLink
PlantRegMapVang0022ss04360.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150400.0AP015040.1 Vigna angularis var. angularis DNA, chromosome 7, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017424650.11e-131PREDICTED: NAC domain-containing protein 76
TrEMBLA0A0L9UJP91e-129A0A0L9UJP9_PHAAN; Uncharacterized protein
TrEMBLA0A0S3SJV81e-129A0A0S3SJV8_PHAAN; Uncharacterized protein
STRINGXP_007149140.11e-106(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF72043447
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G79580.31e-26NAC family protein