PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vang0032ss01120.3
Organism
Vigna angularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family bHLH
Protein Properties Length: 159aa    MW: 17842.7 Da    PI: 5.0424
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Vang0032ss01120.3genomeSNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH20.77.6e-07121143729
                        HHHHHHHHHHHHHHHHHHCTSCC CS
                HLH   7 erErrRRdriNsafeeLrellPk 29 
                        + ErrRRdr+++++  Lr+l+P 
  Vang0032ss01120.3 121 ISERRRRDRMKEKLYALRSLVPF 143
                        78********************6 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474596.54E-8108147IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088810.137114158IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.103.4E-7115144IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000836.82E-6116146No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0034756Biological Processregulation of iron ion transport
GO:0071281Biological Processcellular response to iron ion
GO:0071369Biological Processcellular response to ethylene stimulus
GO:0071732Biological Processcellular response to nitric oxide
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 159 aa     Download sequence    Send to blast
LHIDDFELHD FDEDPNLDHL INFIHLEKKD ATCDFNSELI NEAFIDNSFL PHPAIPYDQC  60
NSNAMNVYDS NSAPNSSCFD GEAKGGGGEE DDMEHSYATT STTTTTPTKS KPKTDRSKTL  120
ISERRRRDRM KEKLYALRSL VPFITKVGVS TTTLKLHT*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1122127ERRRRD
Cis-element ? help Back to Top
SourceLink
PlantRegMapVang0032ss01120.3
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150390.0AP015039.1 Vigna angularis var. angularis DNA, chromosome 6, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017432048.11e-106PREDICTED: transcription factor FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION FACTOR-like
TrEMBLA0A0L9V7H91e-104A0A0L9V7H9_PHAAN; Uncharacterized protein
STRINGXP_007132337.13e-63(Phaseolus vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28160.11e-16FER-like regulator of iron uptake