PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vang0071ss01010.1
Organism
Vigna angularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family Trihelix
Protein Properties Length: 260aa    MW: 28436.2 Da    PI: 10.6333
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Vang0071ss01010.1genomeSNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix36.31.4e-1114782386
           trihelix 23 rgklkkplWeevskkm....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86
                       rg+lk+++W+ev++ +      ++  ++ +qCk++++ ++k+yk +k+    +   ++s++p+fd+l+
  Vang0071ss01010.1 14 RGNLKQKHWKEVADIVsgreDYTKAPKTDIQCKNRIDTVKKKYKSEKAKIAAG---ATSKWPFFDRLD 78
                       689*************854334444556679*****************99986...6779******98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138373.3E-171280No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 260 aa     Download sequence    Send to blast
MNGEALSSSV LNCRGNLKQK HWKEVADIVS GREDYTKAPK TDIQCKNRID TVKKKYKSEK  60
AKIAAGATSK WPFFDRLDKL IGPSAKIPGA GASSGTAGTS AAGNSILQSH KVPLGIPVGV  120
RDGVNQYHRP QRPAQQQQPQ PVPLKNQKIQ FRRRGPPLES DSDERGASSP ASSDSFPPES  180
FERKRPRVMS SNAGKGSEGR RRAKGWGSAF IEVILISDRT LKFNTALTDY QTLSDTLVLV  240
FDVFPNFNFG FFGFFGYSL*
Cis-element ? help Back to Top
SourceLink
PlantRegMapVang0071ss01010.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150420.0AP015042.1 Vigna angularis var. angularis DNA, chromosome 9, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017441369.11e-118PREDICTED: trihelix transcription factor ASIL2
TrEMBLA0A0L9VQ081e-117A0A0L9VQ08_PHAAN; Uncharacterized protein
TrEMBLA0A0S3SZD61e-117A0A0S3SZD6_PHAAN; Uncharacterized protein
STRINGXP_007135401.11e-101(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF79193044
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G14180.12e-30sequence-specific DNA binding transcription factors