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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Vang0121s00760.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
|
| Family |
GRAS |
| Protein Properties |
Length: 507aa MW: 55477 Da PI: 5.4055 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Vang0121s00760.1 | genome | SNU | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 462.2 | 3.1e-141 | 136 | 500 | 1 | 374 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkf 93
lv++L++cAeav++++l+la+al++++ las+++ +m+++a+yf++ALa+r+++ + p+et +++ s+ l++ f+e +P+lkf
Vang0121s00760.1 136 LVHTLMACAEAVQQENLKLADALVKHVGILASSQAGAMRKVASYFAQALARRIYG--------IFPEETLDSSFSDLLHM--HFYESCPYLKF 218
689****************************************************........33444444556666665..5********** PP
GRAS 94 shltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrl 186
+h+taNqaIlea+ ++ rvH+iDf+++qG+QWpaL+qaLa Rp+gpp++R+Tg+g+p+++++++l+++g++La++A+++gv+fef+ +v+++l
Vang0121s00760.1 219 AHFTANQAILEAFTTAGRVHVIDFGLKQGMQWPALMQALALRPGGPPTFRLTGIGPPQPDNTDALQQVGWKLAQLAHTIGVQFEFRGFVCSSL 311
********************************************************************************************* PP
GRAS 187 edleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpres 279
+dl++++L+++pgEa+aVn+v++lhr+l++++s+++ v+++vk+l+Pk+v++veqea+hn++ Fl+rf+eal+yys+lfdsle + +++
Vang0121s00760.1 312 ADLDPNMLEIRPGEAVAVNSVFELHRMLARPGSVDK----VMDTVKKLNPKIVTIVEQEANHNGPVFLDRFTEALHYYSSLFDSLEGSSSSNG 400
****************************99999999....*********************************************99966655 PP
GRAS 280 ....eerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpL 367
+++ +++ +lg++i+nvva eg er+erhetl++Wr r+++aGF pv+l+++a kqa++ll+ ++ +dgyrvee++g+l+lgW++rpL
Vang0121s00760.1 401 lgspNQDLLMSELYLGKQICNVVAYEGVERVERHETLSQWRGRMSSAGFDPVHLGSNAFKQASMLLALFAgGDGYRVEENNGCLMLGWHTRPL 493
777999*************************************************************************************** PP
GRAS 368 vsvSaWr 374
+++SaW+
Vang0121s00760.1 494 IATSAWK 500
******8 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006808 | Biological Process | regulation of nitrogen utilization |
| GO:0009723 | Biological Process | response to ethylene |
| GO:0009737 | Biological Process | response to abscisic acid |
| GO:0009863 | Biological Process | salicylic acid mediated signaling pathway |
| GO:0009867 | Biological Process | jasmonic acid mediated signaling pathway |
| GO:0009938 | Biological Process | negative regulation of gibberellic acid mediated signaling pathway |
| GO:0010187 | Biological Process | negative regulation of seed germination |
| GO:0010218 | Biological Process | response to far red light |
| GO:0010233 | Biological Process | phloem transport |
| GO:0042538 | Biological Process | hyperosmotic salinity response |
| GO:2000033 | Biological Process | regulation of seed dormancy process |
| GO:2000377 | Biological Process | regulation of reactive oxygen species metabolic process |
| GO:0005634 | Cellular Component | nucleus |
| Sequence ? help Back to Top |
| Protein Sequence Length: 507 aa
Download sequence Send
to blast |
MPNGKAKMWE EDRHQQGGGM DELLAALGYK VRASDMADVA QKLEQLEMVM GSAQEEGISH 60
LASDTVHYDP TDLHSWVQSM LAELNPEPTN TILDPSSFLI ENPSHSSSIL TSNSRSASEP 120
TRPVVLVDSQ EAGVRLVHTL MACAEAVQQE NLKLADALVK HVGILASSQA GAMRKVASYF 180
AQALARRIYG IFPEETLDSS FSDLLHMHFY ESCPYLKFAH FTANQAILEA FTTAGRVHVI 240
DFGLKQGMQW PALMQALALR PGGPPTFRLT GIGPPQPDNT DALQQVGWKL AQLAHTIGVQ 300
FEFRGFVCSS LADLDPNMLE IRPGEAVAVN SVFELHRMLA RPGSVDKVMD TVKKLNPKIV 360
TIVEQEANHN GPVFLDRFTE ALHYYSSLFD SLEGSSSSNG LGSPNQDLLM SELYLGKQIC 420
NVVAYEGVER VERHETLSQW RGRMSSAGFD PVHLGSNAFK QASMLLALFA GGDGYRVEEN 480
NGCLMLGWHT RPLIATSAWK LPAPES*
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcriptional regulator that acts as a repressor of the gibberellin (GA) signaling pathway. Probably acts by participating in large multiprotein complexes that repress transcription of GA-inducible genes. Upon GA application, it is degraded by the proteasome, allowing the GA signaling pathway (By similarity). Its degradation is not essential for germination. {ECO:0000250, ECO:0000269|PubMed:15347801}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AP015037 | 0.0 | AP015037.1 Vigna angularis var. angularis DNA, chromosome 4, almost complete sequence, cultivar: Shumari. |
