PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vang01g14980.1
Organism
Vigna angularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family ERF
Protein Properties Length: 138aa    MW: 15708.7 Da    PI: 6.6822
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Vang01g14980.1genomeSNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP222.72.4e-07726222
             AP2  2 gykGVrwdkkrgrWvAeIrdp 22
                    +y+GVr+++ +g+Wv+eIr+p
  Vang01g14980.1  7 RYRGVRQRH-WGSWVSEIRHP 26
                    69******9.*********96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003800.0062759IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.105.5E-10727IPR001471AP2/ERF domain
PROSITE profilePS510329.427747IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 138 aa     Download sequence    Send to blast
MARPQQRYRG VRQRHWGSWV SEIRHPILCY MASLQMTRQA LASSGSERKP SVPNATPASQ  60
PKSLTVKSEQ THQVLPHKRE EEDQDSEANR DVKMARNVES LPLQFKPLEE DHIEQMIEEL  120
LDYGSVELSS VFSPQAL*
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapVang01g14980.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150360.0AP015036.1 Vigna angularis var. angularis DNA, chromosome 3, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017429773.11e-72PREDICTED: protein PPLZ02-like
SwissprotQ94AW53e-27ERF03_ARATH; Ethylene-responsive transcription factor ERF003
TrEMBLA0A0L9V1V33e-71A0A0L9V1V3_PHAAN; Uncharacterized protein
TrEMBLA0A0S3RP703e-71A0A0S3RP70_PHAAN; Uncharacterized protein
STRINGXP_007161152.11e-52(Phaseolus vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G25190.11e-29ERF family protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]