PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vang02g03600.2
Organism
Vigna angularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family bHLH
Protein Properties Length: 211aa    MW: 24291.9 Da    PI: 9.1312
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Vang02g03600.2genomeSNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH383e-12857455
                    HHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  4 ahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55
                    +h+e Er+RR+++ +  ++Lr+llP       ++K s ++ + +A++YI++Lq
  Vang02g03600.2  8 MHKETERQRRQEMGKLCNNLRSLLPLeY---IKGKRSTSDHVHEAMNYINHLQ 57
                    7*************************77...*********************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000832.31E-9261No hitNo description
SuperFamilySSF474594.32E-15373IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088813.452456IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.106.8E-11674IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.6E-9857IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003533.3E-41062IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 211 aa     Download sequence    Send to blast
MDENKKWMHK ETERQRRQEM GKLCNNLRSL LPLEYIKGKR STSDHVHEAM NYINHLQDKV  60
KQLQEKRDAL LKVSNNLSSI ENESSSATHL PPLVLVHPFP GGLEIICSHS FRKSAFPMSR  120
LLDILHKEGL NVVNTTSIRR DGRFIHTIQS EDPNHSNMID TDYSELQIKI TEALSSSIIS  180
MVQPISPAGQ RQWLIKWNHD FKDVTKMLMI *
Cis-element ? help Back to Top
SourceLink
PlantRegMapVang02g03600.2
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150440.0AP015044.1 Vigna angularis var. angularis DNA, chromosome 11, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017439388.11e-156PREDICTED: transcription factor bHLH36-like isoform X1
TrEMBLA0A0L9VIM31e-128A0A0L9VIM3_PHAAN; Uncharacterized protein
STRINGXP_007152369.11e-107(Phaseolus vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51780.12e-28bHLH family protein