PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Vang0300s00260.1

Organism

Vigna angularis

Taxonomic ID

3914

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna

Family

BES1

Protein Properties

Length: 469aa MW: 53213.6 Da PI: 9.6577

Description

BES1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Vang0300s00260.1	genome	SNU	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF822	64.4	4.3e-20	221	271	24	74
DUF822 24 aiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgsk 74 aiaakiy L aq n klp+++Dn eVlkA++ eA w+v++DGttyr ++ Vang0300s00260.1 221 AIAAKIYVDLQAQRNCKLPQHCDNKEVLKAISVEASWIVDEDGTTYRTTKR 271 8**********************************************6544 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF49899	4.07E-20	37	197	IPR013320	Concanavalin A-like lectin/glucanase domain
Pfam	PF08787	8.7E-17	40	199	IPR014895	Alginate lyase 2
Gene3D	G3DSA:2.60.120.200	8.4E-9	54	204	IPR013320	Concanavalin A-like lectin/glucanase domain
Pfam	PF05687	2.2E-18	221	272	IPR008540	BES1/BZR1 plant transcription factor, N-terminal

Sequence ? help Back to Top
Protein Sequence Length: 469 aa Download sequence Send to blast
MLYQSIFHQT FLSFLLCITT LSLVASDPTD GFTRLPLSSS NFQVQKPHDV PQDQRYTFSN 60 GVHTFIVFNT DKPHTSTSNT KPRTEIRITG YDYTSGVWQF EGYFYVPSGT TGVCIQQVFG 120 GVTAATTSQS RVYSGSLTHY LSPTLETNIY NKWYRFNVIH DVGANNVKIF INGVQKFNGN 180 GRGADDHYFK FGVYAQDVSI KNTYLCNLEY IIPSHHPGLG AIAAKIYVDL QAQRNCKLPQ 240 HCDNKEVLKA ISVEASWIVD EDGTTYRTTK RVFFDSAKFA ILHVVNKVGD KIHYRLHPSG 300 LYSSSLDHLP PHFCNIHPRK PLHAYLLALA QSSQGVISQS PRPITPALER LLLRSTSTFE 360 LKGTVSFPST TTIKRSLRLS MQWLVLSLSR KRTWTHTWIP NSWILDEDGT TYRTTKHVFF 420 DSTKFVILHV VDKVGDMIRY RLHPMGCSLL SYNKQESHLS LWRKHQSG*

Sequence ? help Back to Top

Protein Sequence Length: 469 aa Download sequence Send to blast

MLYQSIFHQT FLSFLLCITT LSLVASDPTD GFTRLPLSSS NFQVQKPHDV PQDQRYTFSN  60
GVHTFIVFNT DKPHTSTSNT KPRTEIRITG YDYTSGVWQF EGYFYVPSGT TGVCIQQVFG  120
GVTAATTSQS RVYSGSLTHY LSPTLETNIY NKWYRFNVIH DVGANNVKIF INGVQKFNGN  180
GRGADDHYFK FGVYAQDVSI KNTYLCNLEY IIPSHHPGLG AIAAKIYVDL QAQRNCKLPQ  240
HCDNKEVLKA ISVEASWIVD EDGTTYRTTK RVFFDSAKFA ILHVVNKVGD KIHYRLHPSG  300
LYSSSLDHLP PHFCNIHPRK PLHAYLLALA QSSQGVISQS PRPITPALER LLLRSTSTFE  360
LKGTVSFPST TTIKRSLRLS MQWLVLSLSR KRTWTHTWIP NSWILDEDGT TYRTTKHVFF  420
DSTKFVILHV VDKVGDMIRY RLHPMGCSLL SYNKQESHLS LWRKHQSG*

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
5zd4_A	3e-13	221	267	391	437	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B	3e-13	221	267	391	437	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C	3e-13	221	267	391	437	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D	3e-13	221	267	391	437	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Vang0300s00260.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	AP015035	0.0	AP015035.1 Vigna angularis var. angularis DNA, chromosome 2, almost complete sequence, cultivar: Shumari.

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G36780.1	1e-16	BES1/BZR1 homolog 2