PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Vang0326s00020.2

Common Name

LR48_Vigan05g112000

Organism

Vigna angularis

Taxonomic ID

3914

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna

Family

bZIP

Protein Properties

Length: 235aa MW: 26116.4 Da PI: 9.1687

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Vang0326s00020.2	genome	SNU	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	35.8	1.8e-11	83	128	5	50
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50 kr +r NR +A+rsR RK+++i eLe+ v +L++e +aL ++ Vang0326s00020.2 83 KRVKRILANRQSAQRSRVRKLQYISELERSVTTLQTEVSALSPRVA 128 8999*********************************999987765 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	2.2E-14	79	143	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	9.703	81	133	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	4.3E-10	83	127	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	7.8E-12	83	137	No hit	No description
Gene3D	G3DSA:1.20.5.170	2.8E-14	83	134	No hit	No description
CDD	cd14703	7.28E-20	84	134	No hit	No description
PROSITE pattern	PS00036	0	86	101	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 235 aa Download sequence Send to blast
LISMFSDDIS AAALPPPPLS SASNPSSPSS DQNSNNEEKP MAMTLDLKPK TEKVEEESSC 60 KNEAAALQLS ATTTSPETVV DPKRVKRILA NRQSAQRSRV RKLQYISELE RSVTTLQTEV 120 SALSPRVAFL DHQRLILNVD NSALKQRIAA LAQDKIFKDA HQEALKKEIE RLRQIYHQQN 180 LQKMSNTLNN NLQNPSTSQP QATIQSHSLH QHQHQQQIAV SQPLGCKDKE QLLS*

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional activator. {ECO:0000269\|PubMed:17719007}.

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Vang0326s00020.2

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	AP015040	1e-143	AP015040.1 Vigna angularis var. angularis DNA, chromosome 7, almost complete sequence, cultivar: Shumari.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_017424225.1	1e-167	PREDICTED: basic leucine zipper 34-like
Swissprot	Q9M2K4	4e-67	BZP61_ARATH; Basic leucine zipper 61
TrEMBL	A0A0L9ULF3	1e-166	A0A0L9ULF3_PHAAN; Uncharacterized protein
STRING	XP_007149416.1	1e-121	(Phaseolus vulgaris)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G58120.1	1e-65	bZIP family protein

Publications ? help Back to Top
Ding Y, et al. Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] Yang K, et al. Genome sequencing of adzuki bean (Vigna angularis) provides insight into high starch and low fat accumulation and domestication. Proc. Natl. Acad. Sci. U.S.A., 2015. 112(43): p. 13213-8 [PMID:26460024] Gibalová A, et al. Characterization of pollen-expressed bZIP protein interactions and the role of ATbZIP18 in the male gametophyte. Plant Reprod, 2017. 30(1): p. 1-17 [PMID:27896439] Ezer D, et al. The G-Box Transcriptional Regulatory Code in Arabidopsis. Plant Physiol., 2017. 175(2): p. 628-640 [PMID:28864470]