PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vang0352s00010.1
Organism
Vigna angularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family WRKY
Protein Properties Length: 246aa    MW: 28054.8 Da    PI: 7.1081
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Vang0352s00010.1genomeSNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY34.34.7e-111081571359
                       E--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
              WRKY  13 KevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                       K+ +gs   +sYYrCt++   gCp+ k+v+r +e p + ++tY g+H+++
  Vang0352s00010.1 108 KKPRGSYKRKSYYRCTHKhdkGCPAIKQVQRIQEHPPLYQTTYYGHHKCK 157
                       677899999********99999**************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.806.4E-11108158IPR003657WRKY domain
SMARTSM007743.9E-9108158IPR003657WRKY domain
SuperFamilySSF1182903.27E-11108158IPR003657WRKY domain
PfamPF031067.5E-12108157IPR003657WRKY domain
PROSITE profilePS5081111.727108159IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 246 aa     Download sequence    Send to blast
MVNQPSTERR AMEEELVKGR DIANQLLEVC IHRSNTYQHH HEDVQGSMLP FIEDLVRKVL  60
CSFTNTLLLL NTDNDVAIPM TVKDVPSFSK CPNPQHTDEV CKGFFQTKKP RGSYKRKSYY  120
RCTHKHDKGC PAIKQVQRIQ EHPPLYQTTY YGHHKCKSSS SSDIVMESAT PSGSSVFLSF  180
SNTLPTKEQY QLKSCSLSSS TKQEPVEVIQ DELLADHSPL ALSDYLLLCD YELDFNYMRH  240
VTTLF*
Cis-element ? help Back to Top
SourceLink
PlantRegMapVang0352s00010.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150400.0AP015040.1 Vigna angularis var. angularis DNA, chromosome 7, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_014521524.11e-159probable WRKY transcription factor 54
RefseqXP_017423510.11e-159PREDICTED: probable WRKY transcription factor 70
TrEMBLA0A0L9UK961e-158A0A0L9UK96_PHAAN; Uncharacterized protein
TrEMBLA0A1S3VTX81e-158A0A1S3VTX8_VIGRR; probable WRKY transcription factor 54
STRINGXP_007149559.11e-132(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF126381134
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G22570.12e-13WRKY DNA-binding protein 38