PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vang04g07160.1
Organism
Vigna angularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family WRKY
Protein Properties Length: 197aa    MW: 22024.6 Da    PI: 4.7935
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Vang04g07160.1genomeSNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY37.45.1e-1250892259
                    EEEEEE-ST..T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY 22 rsYYrCtsa..gCpvkkkversaedpkvveitYegeHnhe 59
                     +Y+rCt++  gC+++k+v+r +edp + +++Y geH ++
  Vang04g07160.1 50 MNYFRCTHRdqGCQATKQVQRVQEDPILYKTIYYGEHSCK 89
                    58******9999*************************997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM007746.6E-94290IPR003657WRKY domain
PfamPF031063.6E-125089IPR003657WRKY domain
Gene3DG3DSA:2.20.25.802.9E-125090IPR003657WRKY domain
SuperFamilySSF1182901.16E-115189IPR003657WRKY domain
PROSITE profilePS5081110.1665187IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 197 aa     Download sequence    Send to blast
MDKLGGSTIR MKAIEELLRG RDSATQLRSV INGNGEDSPS AEKLVKEVLM NYFRCTHRDQ  60
GCQATKQVQR VQEDPILYKT IYYGEHSCKN MGNPEIILDM SPSSSSKFLS FNNSFSTQSQ  120
QECPFLSSSF PSSVKRECKE EIPPSTSSND YLISSGLTFD GSPRHVTLSS STPDSEYKAV  180
DFPDLYDVFE DLLEFR*
Cis-element ? help Back to Top
SourceLink
PlantRegMapVang04g07160.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150370.0AP015037.1 Vigna angularis var. angularis DNA, chromosome 4, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017408550.13e-96PREDICTED: probable WRKY transcription factor 70 isoform X2
TrEMBLA0A0S3RTJ63e-90A0A0S3RTJ6_PHAAN; Uncharacterized protein
STRINGGLYMA18G44560.19e-65(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF19953486
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56400.12e-10WRKY DNA-binding protein 70