PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vang0537s00150.1
Organism
Vigna angularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family bHLH
Protein Properties Length: 236aa    MW: 25655.7 Da    PI: 9.1098
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Vang0537s00150.1genomeSNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.67.2e-11118165455
                       HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                       +h+ +Er RR++i +++  L++l+P +    +k   Ka +L + ++YI+sLq
  Vang0537s00150.1 118 SHSLAERARREKISERMKILQDLVPGC----NKVIGKALVLDEIINYIQSLQ 165
                       8*************************9....677*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000832.67E-10112169No hitNo description
SuperFamilySSF474596.41E-18112182IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.103.6E-18114182IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.828114164IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000103.1E-8118165IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.0E-10120170IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0048446Biological Processpetal morphogenesis
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 236 aa     Download sequence    Send to blast
MDRSKPKFPP PNAQDATAAL CLSRAHFGHG LSDFGPGPGS IGHKKRRDSE EEESKEGGGV  60
GDGKRVKTTG NQKSESAKGE GESSSGKLAE QGGKPPPEPP SKQDYIHVRA RRGQATDSHS  120
LAERARREKI SERMKILQDL VPGCNKVIGK ALVLDEIINY IQSLQRQVEF LSMKLEAVNS  180
RIPSGIEVFP PKDFDQQTFD TTGIAFASQP TREYSRGSSP EWLHMQVGSG FERAT*
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that forms a ternary complex with RSS3 and TIFY11A/JAZ9 to negatively regulate jasmonate-responsive genes. {ECO:0000269|PubMed:23715469}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00207DAPTransfer from AT1G59640Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapVang0537s00150.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150431e-112AP015043.1 Vigna angularis var. angularis DNA, chromosome 10, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017410108.11e-164PREDICTED: transcription factor bHLH79-like
SwissprotQ69WS32e-75BH094_ORYSJ; Transcription factor BHLH094
TrEMBLA0A0S3T2H01e-162A0A0S3T2H0_PHAAN; Uncharacterized protein
STRINGXP_007157558.11e-141(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF117134105
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G59640.14e-80BIG PETAL P