PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vang0599s00010.1
Organism
Vigna angularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family NAC
Protein Properties Length: 243aa    MW: 28186.3 Da    PI: 6.8581
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Vang0599s00010.1genomeSNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM55.12.5e-1766653128
               NAM  53 aeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                       ++++ewyfF +rd+ky+ + r+nrat +gyWk+tgkd++v               +y+grap+g +tdWvmhey l
  Vang0599s00010.1   6 SRDTEWYFFGPRDRKYPIEFRTNRATPAGYWKSTGKDTKV---------------YYRGRAPQGIRTDWVMHEYCL 66 
                       4689********************************8766...............789****************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100513.6731102IPR003441NAC domain
SuperFamilySSF1019417.19E-23673IPR003441NAC domain
PfamPF023655.6E-91066IPR003441NAC domain
SuperFamilySSF545938.75E-978202IPR029068Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
CDDcd072452.80E-2078197No hitNo description
Gene3DG3DSA:3.10.180.104.5E-1479200IPR029068Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 243 aa     Download sequence    Send to blast
KSFLPSRDTE WYFFGPRDRK YPIEFRTNRA TPAGYWKSTG KDTKVYYRGR APQGIRTDWV  60
MHEYCLDDKE CEDTTGLQNI LGFFPIRRPG SLDFDGAWLF GYGIGIHLLQ VEDPSNIPRK  120
KEINPKDNHI SFQAPFQCER KFVSYHYMKL IACESMGPVE KKLEEMEIEY ARGTVEEGGI  180
KVDQLFFHDP DGFMIEICNC DILPVIPLPS HMVRSCSRMN LQMLQQRQTH QIVKQDSALM  240
LS*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A2e-16106670140Stress-induced transcription factor NAC1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapVang0599s00010.1
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150391e-151AP015039.1 Vigna angularis var. angularis DNA, chromosome 6, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017431843.11e-100PREDICTED: uncharacterized protein LOC108339213
TrEMBLA0A0S3SFC67e-91A0A0S3SFC6_PHAAN; Uncharacterized protein
STRINGXP_002517606.11e-74(Ricinus communis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G17730.12e-39NAC domain containing protein 57