PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Vang05g04610.1

Common Name

LR48_Vigan04g240000

Organism

Vigna angularis

Taxonomic ID

3914

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna

Family

bZIP

Protein Properties

Length: 121aa MW: 13945 Da PI: 11.3394

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Vang05g04610.1	genome	SNU	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	35.2	2.6e-11	39	86	4	51
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkelee 51 ++ rr+q+NRe+ArrsR RKk+ +e+L+ k L +N+ Lk++l + Vang05g04610.1 39 ERKLRRMQSNRESARRSRYRKKKHLENLTSQLKRLRIQNRFLKNRLAS 86 5789***************************************66544 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	1.7E-9	33	87	No hit	No description
SMART	SM00338	7.6E-9	36	107	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	10.128	38	85	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	9.2E-9	39	87	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	1.34E-11	40	94	No hit	No description
CDD	cd14702	3.61E-15	41	91	No hit	No description
PROSITE pattern	PS00036	0	43	58	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 121 aa Download sequence Send to blast
MLTQSDIEDL FSLINKSIDR PSPGSGSQGS NRTVYSSEER KLRRMQSNRE SARRSRYRKK 60 KHLENLTSQL KRLRIQNRFL KNRLASTMHQ HLLLSLHNDH LKSEAIAHMA TLSDLCGILF 120 *

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Vang05g04610.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	AP015035	0.0	AP015035.1 Vigna angularis var. angularis DNA, chromosome 2, almost complete sequence, cultivar: Shumari.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_017420493.1	5e-82	PREDICTED: bZIP transcription factor 44-like
TrEMBL	A0A0L9UI14	1e-80	A0A0L9UI14_PHAAN; Uncharacterized protein
TrEMBL	A0A0S3RBR2	1e-80	A0A0S3RBR2_PHAAN; Uncharacterized protein
STRING	GLYMA04G05030.2	2e-67	(Glycine max)
STRING	XP_007136783.1	1e-67	(Phaseolus vulgaris)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF5996	30	52

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G49760.1	4e-16	basic leucine-zipper 5

Publications ? help Back to Top
Yang K, et al. Genome sequencing of adzuki bean (Vigna angularis) provides insight into high starch and low fat accumulation and domestication. Proc. Natl. Acad. Sci. U.S.A., 2015. 112(43): p. 13213-8 [PMID:26460024]