PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vang05g08140.1
Organism
Vigna angularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family WRKY
Protein Properties Length: 219aa    MW: 24229.8 Da    PI: 10.3075
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Vang05g08140.1genomeSNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY100.78.7e-32142200259
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     +D+++WrKYGqK++kgs++pr+YY+C++  gCp++k+ver+++dp+++++tYegeH+h+
  Vang05g08140.1 142 SDEFSWRKYGQKPIKGSPYPRGYYKCSTVrGCPARKHVERASDDPTMLIVTYEGEHRHS 200
                     69************************9888****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF105334.8E-8120139IPR018872Zn-cluster domain
Gene3DG3DSA:2.20.25.802.1E-33129200IPR003657WRKY domain
PROSITE profilePS5081131.169136202IPR003657WRKY domain
SuperFamilySSF1182909.15E-27139201IPR003657WRKY domain
SMARTSM007742.3E-37141201IPR003657WRKY domain
PfamPF031065.5E-27143199IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 219 aa     Download sequence    Send to blast
MAVELMSLPK MEEQKAIQEA AMEGLKGMEN FIHLLSNEPS HLNTHLTQAT VSNFKKLISL  60
LNGTGHARFR RAPLPSNNQP IPPANPVTVH QPPTTFAPTH SHSLTLDFTK PNIFAATNNK  120
KNRVKKTVRV PAISTKIADI PSDEFSWRKY GQKPIKGSPY PRGYYKCSTV RGCPARKHVE  180
RASDDPTMLI VTYEGEHRHS IQTALQDNIS GAVGLVFQ*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A5e-23129201273WRKY transcription factor 1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapVang05g08140.1
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By salicylic acid. {ECO:0000269|PubMed:11449049}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150350.0AP015035.1 Vigna angularis var. angularis DNA, chromosome 2, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017421028.19e-81PREDICTED: probable WRKY transcription factor 17
SwissprotO221768e-54WRK15_ARATH; Probable WRKY transcription factor 15
TrEMBLA0A0L9UH522e-79A0A0L9UH52_PHAAN; Uncharacterized protein
TrEMBLA0A0S3RCE52e-79A0A0S3RCE5_PHAAN; Uncharacterized protein
STRINGEMJ234001e-69(Prunus persica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF13143498
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31550.19e-47WRKY DNA-binding protein 11
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  2. Van Aken O, et al.
    Mitochondrial and Chloroplast Stress Responses Are Modulated in Distinct Touch and Chemical Inhibition Phases.
    Plant Physiol., 2016. 171(3): p. 2150-65
    [PMID:27208304]
  3. Liu F, et al.
    Interactions of WRKY15 and WRKY33 transcription factors and their roles in the resistance of oilseed rape to Sclerotinia infection.
    Plant Biotechnol. J., 2018. 16(4): p. 911-925
    [PMID:28929638]