PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vang05g09330.3
Organism
Vigna angularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family ARR-B
Protein Properties Length: 143aa    MW: 16003 Da    PI: 5.1771
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Vang05g09330.3genomeSNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like37.93.9e-121131412553
         G2-like  25 ekAtPktilelmkvkgLtlehvkSHLQkY 53 
                      +A+Pk+il+lm+v+ Lt+e+v+SHLQ +
  Vang05g09330.3 113 AEAVPKKILDLMNVEKLTRENVASHLQAF 141
                     57*************************87 PP
2Response_reg64.84e-2289621109
                     TTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTESEEEESS--HHHHHH CS
    Response_reg  21 egyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGakdflsKpfdpeelvk 109
                     +g+  v+++ ++  al+ll+e++  +Dl++ D+ mp+mdG++ll+     e++lp+i+++a+g+ +++ + ++ Ga d+l Kp+ +eel +
  Vang05g09330.3   8 DGV-AVTTTNQAITALALLREHKdkFDLVISDVHMPDMDGFKLLELVGL-EMDLPVIMLSANGDTKLVMKGISHGACDYLLKPVRMEELKN 96 
                     677.8999999********999889*******************87754.558***********************************987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM004488.6E-15198IPR001789Signal transduction response regulator, receiver domain
PROSITE profilePS5011035.3431102IPR001789Signal transduction response regulator, receiver domain
CDDcd001562.96E-211101No hitNo description
Gene3DG3DSA:3.40.50.23001.4E-294101No hitNo description
SuperFamilySSF521723.98E-274101IPR011006CheY-like superfamily
PfamPF000725.5E-19696IPR001789Signal transduction response regulator, receiver domain
TIGRFAMsTIGR015577.5E-12113142IPR006447Myb domain, plants
Gene3DG3DSA:1.10.10.602.9E-10113141IPR009057Homeodomain-like
SuperFamilySSF466894.48E-5113142IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000160Biological Processphosphorelay signal transduction system
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 143 aa     Download sequence    Send to blast
MIFILVMDGV AVTTTNQAIT ALALLREHKD KFDLVISDVH MPDMDGFKLL ELVGLEMDLP  60
VIMLSANGDT KLVMKGISHG ACDYLLKPVR MEELKNIWQH YEFGLHDIVV LLAEAVPKKI  120
LDLMNVEKLT RENVASHLQA FF*
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specific DNA sequence. Functions as a response regulator involved in His-to-Asp phosphorelay signal transduction system. Phosphorylation of the Asp residue in the receiver domain activates the ability of the protein to promote the transcription of target genes. May directly activate some type-A response regulators in response to cytokinins (By similarity). Functions as a response regulator in response to cytokinins (PubMed:22383541). {ECO:0000250|UniProtKB:Q940D0, ECO:0000269|PubMed:22383541}.
UniProtTranscriptional activator that binds specific DNA sequence. Functions as a response regulator involved in His-to-Asp phosphorelay signal transduction system. Phosphorylation of the Asp residue in the receiver domain activates the ability of the protein to promote the transcription of target genes. May directly activate some type-A response regulators in response to cytokinins. {ECO:0000250|UniProtKB:Q940D0}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapVang05g09330.3
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150351e-99AP015035.1 Vigna angularis var. angularis DNA, chromosome 2, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020989808.13e-58LOW QUALITY PROTEIN: two-component response regulator ARR12
SwissprotB8B3I45e-50ORR22_ORYSI; Two-component response regulator ORR22
SwissprotQ5SML55e-50ORR22_ORYSJ; Two-component response regulator ORR22
TrEMBLA0A103XN084e-60A0A103XN08_CYNCS; Two-component response regulator
STRINGXP_007136967.12e-55(Phaseolus vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31920.16e-50response regulator 10
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]