PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vang06g07550.1
Common NameLR48_Vigan02g204200
Organism
Vigna angularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family bZIP
Protein Properties Length: 313aa    MW: 34562.3 Da    PI: 6.635
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Vang06g07550.1genomeSNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_126.51.4e-08166208547
                     CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkk 47 
                     k+++r   NRe+A +s +RKk ++ eL++ v+ Le + + L +
  Vang06g07550.1 166 KKAKRILANRESAAKSKERKKRYLIELQKNVELLEIQITNLFN 208
                     899*******************************988777665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003380.001162226IPR004827Basic-leucine zipper domain
PfamPF077162.0E-7164213IPR004827Basic-leucine zipper domain
PROSITE profilePS502178.76164214IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.7E-7166214No hitNo description
SuperFamilySSF579594.1E-9166214No hitNo description
CDDcd147039.14E-15167218No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 313 aa     Download sequence    Send to blast
MENNDIGAPS DASLFDQIVA TEQPYIPIHS DPSYPLLDTF VDLLNVDTKH FDFEMFNSPL  60
PPPPPPTAPL VSVHSETSEK PNEQSSKPAP VGSTDGLDSG KSVVSDDLCM AGGAKNSGEN  120
KQKPRRQNVP LDASLTALMQ AGPAISLARR PMGPEELAEL AMVDPKKAKR ILANRESAAK  180
SKERKKRYLI ELQKNVELLE IQITNLFNNI CLLQMGNRGR ALHVKEVRVK LDIMREEDRI  240
KDALSVVLNG EIQGLKDENR NLDVLLSCRF QGNIFSPFSS KLPLQQFHNP PSQQHLNPQQ  300
PQLSRGHYGP NI*
Cis-element ? help Back to Top
SourceLink
PlantRegMapVang06g07550.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150410.0AP015041.1 Vigna angularis var. angularis DNA, chromosome 8, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017414204.10.0PREDICTED: transcription factor VIP1
TrEMBLA0A0L9TZP20.0A0A0L9TZP2_PHAAN; Uncharacterized protein
TrEMBLA0A0S3SNG60.0A0A0S3SNG6_PHAAN; Uncharacterized protein
STRINGXP_007143526.11e-70(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF1727633
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40620.14e-26bZIP family protein
Publications ? help Back to Top
  1. Yang K, et al.
    Genome sequencing of adzuki bean (Vigna angularis) provides insight into high starch and low fat accumulation and domestication.
    Proc. Natl. Acad. Sci. U.S.A., 2015. 112(43): p. 13213-8
    [PMID:26460024]