PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vang06g07640.1
Organism
Vigna angularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family Trihelix
Protein Properties Length: 222aa    MW: 26391.2 Da    PI: 10.1417
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Vang06g07640.1genomeSNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix95.16.5e-30107188587
        trihelix   5 qevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 
                     +ev+aLi++r+++e++++++  k+plWe++s+ m + g++rs+k+Ckekwen+nk++kk+ke++k r  e+s+tcpyf++l+a
  Vang06g07640.1 107 SEVHALIRLRTSLETKYQENGPKAPLWEDISAGMLRLGYNRSAKRCKEKWENINKYFKKVKESSKHR-RENSKTCPYFQELDA 188
                     69***************************************************************87.78889*******985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138375.6E-21107189No hitNo description
CDDcd122038.82E-22107167No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 222 aa     Download sequence    Send to blast
MNNLFSTTST SSSTASDEDL EEKYRKKRKW KDYFRRLTRQ VLAKQEEMQK RFLEAIDKRE  60
REHVAQQEAW RILEMARINR EHELLVQERS TAAAKNAAVI AFLQQLSEVH ALIRLRTSLE  120
TKYQENGPKA PLWEDISAGM LRLGYNRSAK RCKEKWENIN KYFKKVKESS KHRRENSKTC  180
PYFQELDAIY KEKSKSQNPF GVSFLNMKPH EMMEPLMVQP EQ
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor that binds specific DNA sequence. {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapVang06g07640.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150410.0AP015041.1 Vigna angularis var. angularis DNA, chromosome 8, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016204388.12e-95trihelix transcription factor GT-2
RefseqXP_025657036.22e-95trihelix transcription factor GT-2
SwissprotQ391171e-40TGT2_ARATH; Trihelix transcription factor GT-2
TrEMBLA0A151S7141e-126A0A151S714_CAJCA; Uncharacterized protein
STRINGXP_007152025.11e-87(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF37334181
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G76890.28e-53Trihelix family protein