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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Vang06g09640.8 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
|
| Family |
GRAS |
| Protein Properties |
Length: 385aa MW: 42668.7 Da PI: 6.5046 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Vang06g09640.8 | genome | SNU | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 426.5 | 2.2e-130 | 13 | 370 | 1 | 374 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdg..dpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkf 93
lv++L++cA+ v+ gdl+ a +l++ ++ l + + ++a yf AL++r+++ ++a+p+s+ e+ ++ ++e++P+lkf
Vang06g09640.8 13 LVHTLITCADSVQRGDLAFAGSLIESMQALLAHVNtsCGIGKVAGYFIDALRRRISS---PQSAAFPTSPY------ENEVLYHHYYEACPYLKF 98
689**************************944444136899***************9...22333444444......45556788********** PP
GRAS 94 shltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrled 188
+h+taNqaIlea++g+++vH+iDf+++qGlQWpaL+qaLa Rp+gppslR+Tgvg+p+++++++l+e+g rLa++A++++v+f f+ ++a rled
Vang06g09640.8 99 AHFTANQAILEAFNGHDCVHVIDFNLMQGLQWPALIQALALRPGGPPSLRLTGVGPPSPDERDTLREIGARLAELAHSVNVRFTFRGVAAWRLED 193
***************************************************************************************9888**** PP
GRAS 189 leleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseeri 283
+++++L+v+p+Ea+aVn+++qlhr+l s +d+vL ++sl+Pk+v+vveqea+hn+e Flerf+eal+yys++fdslea e ++
Vang06g09640.8 194 VKPWMLQVSPKEAVAVNSIMQLHRVL------GSGIDTVLGWIRSLNPKIVTVVEQEANHNGEGFLERFTEALHYYSTVFDSLEAC---SVEPDK 279
*************************9......556789*********************************************998...357788 PP
GRAS 284 kvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
+ +++l+rei+nvv+ceg +r erhe l+kWrerl++aGF+p++l+++a+kqa++ll ++ +gy vee++g+l+lgW++rpL+++SaW+
Vang06g09640.8 280 GLAEMYLQREICNVVCCEGPARLERHEPLAKWRERLGRAGFRPLHLGSNAYKQASMLLTLFSAEGYCVEENQGCLTLGWHSRPLIAASAWQ 370
889999************************************************************************************6 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 385 aa
Download sequence Send
to blast |
MVTTVEEDSG IRLVHTLITC ADSVQRGDLA FAGSLIESMQ ALLAHVNTSC GIGKVAGYFI 60
DALRRRISSP QSAAFPTSPY ENEVLYHHYY EACPYLKFAH FTANQAILEA FNGHDCVHVI 120
DFNLMQGLQW PALIQALALR PGGPPSLRLT GVGPPSPDER DTLREIGARL AELAHSVNVR 180
FTFRGVAAWR LEDVKPWMLQ VSPKEAVAVN SIMQLHRVLG SGIDTVLGWI RSLNPKIVTV 240
VEQEANHNGE GFLERFTEAL HYYSTVFDSL EACSVEPDKG LAEMYLQREI CNVVCCEGPA 300
RLERHEPLAK WRERLGRAGF RPLHLGSNAY KQASMLLTLF SAEGYCVEEN QGCLTLGWHS 360
RPLIAASAWQ AAPLREGETV RFQR*
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcriptional regulator that acts as a repressor of the gibberellin (GA) signaling pathway. Probably acts by participating in large multiprotein complexes that repress transcription of GA-inducible genes. Upon GA application, it is degraded by the proteasome, allowing the GA signaling pathway. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AP015041 | 0.0 | AP015041.1 Vigna angularis var. angularis DNA, chromosome 8, almost complete sequence, cultivar: Shumari. |
