PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vang06g10530.3
Organism
Vigna angularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family GeBP
Protein Properties Length: 243aa    MW: 26944.8 Da    PI: 9.8175
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Vang06g10530.3genomeSNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF573116.31.8e-3646139295
          DUF573   2 lfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskki 95 
                     lfqrlw++eDei lLqG++d++a++g+s ++d+  fy+++k+++++ ++k+qlveK+rrLKkK+++  +k+++gke+sf+++hd+ +fe+s++i
  Vang06g10530.3  46 LFQRLWTDEDEIGLLQGFLDYTAQRGSSHHNDTALFYDQIKSKLQLGFNKNQLVEKLRRLKKKYRNVLTKINDGKEFSFKSPHDRATFEISRRI 139
                     79******************************************************************************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045049.9E-3347139IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 243 aa     Download sequence    Send to blast
LAAPASAVSQ TLGTASTAIV VADSSPKRPR TEQVEEKKAL DDSRRLFQRL WTDEDEIGLL  60
QGFLDYTAQR GSSHHNDTAL FYDQIKSKLQ LGFNKNQLVE KLRRLKKKYR NVLTKINDGK  120
EFSFKSPHDR ATFEISRRIE ETVRSCVSPV LKELVSGGMG FGSGFGFGGR GFGVGGGFPL  180
NSLQMQMPMA LSSLNLGIGE MVMDEKWRKQ QILELEVYSK RLELVQNEIK VALEELRSSG  240
GG*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12531PKRPRTE
Cis-element ? help Back to Top
SourceLink
PlantRegMapVang06g10530.3
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150410.0AP015041.1 Vigna angularis var. angularis DNA, chromosome 8, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017438647.12e-95PREDICTED: mediator-associated protein 1-like
SwissprotQ9CAV76e-52STKLJ_ARATH; Probable transcription factor At3g04930
TrEMBLA0A0S3SQ744e-94A0A0S3SQ74_PHAAN; Uncharacterized protein
STRINGXP_007144806.13e-90(Phaseolus vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G04930.26e-55DNA-binding storekeeper protein-related transcriptional regulator