PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vang06g15970.1
Organism
Vigna angularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family WRKY
Protein Properties Length: 255aa    MW: 28665.8 Da    PI: 6.2398
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Vang06g15970.1genomeSNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY25.82.1e-081331583459
                     -EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY  34 vkkkversaedpkvveitYegeHnhe 59 
                     ++k+vers +dp+vv++tYeg+H+h+
  Vang06g15970.1 133 SQKRVERSFTDPSVVVTTYEGQHTHP 158
                     68***********************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM007740.0041125159IPR003657WRKY domain
PfamPF031061.8E-4133158IPR003657WRKY domain
PROSITE profilePS5081110.808134160IPR003657WRKY domain
Gene3DG3DSA:2.20.25.802.5E-6134160IPR003657WRKY domain
SuperFamilySSF1182904.18E-5134160IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 255 aa     Download sequence    Send to blast
MEKKEMVVKT EDAVGSSSFP CYNSNVYPFS NTFDFSEVEK SSLGFMELLG VQDYSPLLEL  60
PQLSTVSVPH HSTVKAPPDN GKECSEVEAQ EDKSEETERT KIRVHDEKRG RSSGRWVQME  120
EVRSKGREKQ PFSQKRVERS FTDPSVVVTT YEGQHTHPSP VMPRSGVPAG YATNFTSVFP  180
QAGNYLSHYQ QQHQQQQLIF NTLSSLGFPY NDSSTPKNAG FTQERRLCNP GTNAFLRDHG  240
LLQDVVPSHM LKEE*
Cis-element ? help Back to Top
SourceLink
PlantRegMapVang06g15970.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150410.0AP015041.1 Vigna angularis var. angularis DNA, chromosome 8, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020226824.11e-106WRKY transcription factor 23
TrEMBLA0A371H0Z81e-120A0A371H0Z8_MUCPR; WRKY transcription factor
STRINGXP_007145134.18e-69(Phaseolus vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G62340.18e-17WRKY family protein