PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vang06g25600.1
Organism
Vigna angularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family bHLH
Protein Properties Length: 223aa    MW: 25632.2 Da    PI: 8.6069
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Vang06g25600.1genomeSNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH15.43.4e-0597125538
                     HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-S CS
             HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKl 38 
                     h ++Er RR+r +++   L ++lP+      +K 
  Vang06g25600.1  97 HMINERMRRQRQRQCCLALHSILPHG-----TKT 125
                     7899*********************5.....222 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474593.14E-989154IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS508889.89692141IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.105.2E-597152IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009414Biological Processresponse to water deprivation
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 223 aa     Download sequence    Send to blast
MDSFFPEKLL GEIFWDQPLL PTDQSDVVQN SHIKAEAFPP ATQSAFLQYR DLPRRNNPLN  60
GSNSESMSKR MLAFLRKSSP VERNNVEENE RDRSFRHMIN ERMRRQRQRQ CCLALHSILP  120
HGTKTDNNSV IQTAAKEIVR LKGCREELQR KICEAEGVCV RKKDGGRKIA YLRVADPECG  180
IDSMVERLKW LKEEGVESRR IKSSFSPKEL FAVLEIESGE EV*
Cis-element ? help Back to Top
SourceLink
PlantRegMapVang06g25600.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150410.0AP015041.1 Vigna angularis var. angularis DNA, chromosome 8, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017412801.11e-164PREDICTED: transcription factor bHLH92
TrEMBLA0A0S3SV841e-163A0A0S3SV84_PHAAN; Uncharacterized protein
STRINGXP_007145939.11e-130(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF125722734
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G43650.13e-24bHLH family protein