PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vang0711s00030.1
Organism
Vigna angularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family Trihelix
Protein Properties Length: 174aa    MW: 19296.6 Da    PI: 10.844
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Vang0711s00030.1genomeSNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix52.81.1e-1628118186
          trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm......rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                       +W+++ + +Liea  e++ +l+rg+l++ +W+ev++ +      +    +r+ +qCk++++ l+k+yk +k++ ++   +s + +p+f++le
  Vang0711s00030.1  28 CWSEEATFTLIEAWGERHLELNRGNLRQRHWQEVADTVnarhgnAGARARRTDVQCKNRIDTLKKKYKIEKARVSDS-GDSATAWPFFRRLE 118
                       7*************************************9988766667799*********************99985.677779*****997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138373.1E-2626119No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 174 aa     Download sequence    Send to blast
MDSIAGAPPH TATPPSSRPS PFPGREDCWS EEATFTLIEA WGERHLELNR GNLRQRHWQE  60
VADTVNARHG NAGARARRTD VQCKNRIDTL KKKYKIEKAR VSDSGDSATA WPFFRRLEFL  120
IGDNFPAKKP SPPESGSADR RSTPPAKSPA WALIPLHLQK MNRSNSKRSS ATG*
Cis-element ? help Back to Top
SourceLink
PlantRegMapVang0711s00030.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150400.0AP015040.1 Vigna angularis var. angularis DNA, chromosome 7, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017424248.11e-113PREDICTED: trihelix transcription factor ASIL1
TrEMBLA0A0L9UM071e-111A0A0L9UM07_PHAAN; Uncharacterized protein
TrEMBLA0A0S3SHV21e-111A0A0S3SHV2_PHAAN; Uncharacterized protein
STRINGXP_007149737.15e-97(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF18873379
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58630.12e-38sequence-specific DNA binding transcription factors