PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vang07g06810.1
Organism
Vigna angularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family WRKY
Protein Properties Length: 351aa    MW: 39408.8 Da    PI: 6.0833
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Vang07g06810.1genomeSNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY84.88.3e-27126186259
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                     +D y+WrKYGqK++ ++++prsYYrCt++   gC ++k+v+rs+ed++v++i Y+g+H ++
  Vang07g06810.1 126 QDDYSWRKYGQKNILNAKYPRSYYRCTFQkskGCFATKQVQRSEEDTNVFDISYRGSHVCS 186
                     8**************************998899*************************987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.803.4E-26118187IPR003657WRKY domain
PROSITE profilePS5081121.23120183IPR003657WRKY domain
SuperFamilySSF1182902.22E-23124187IPR003657WRKY domain
SMARTSM007741.7E-34125187IPR003657WRKY domain
PfamPF031061.8E-23126185IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 351 aa     Download sequence    Send to blast
MESEKSWEQK ALVSELIQGL QIAIKLKENF NIPSSIHTRD SLLQSILSSY DKALLILKQN  60
APFSNSETMH QPTQTSSPQF PPKDHYEGAL KDHQELKQNS KKRKKMPKWT EQVRVKIQNG  120
VEEPLQDDYS WRKYGQKNIL NAKYPRSYYR CTFQKSKGCF ATKQVQRSEE DTNVFDISYR  180
GSHVCSQGNY AVLPLKLADT EEKSQGCDSD VQFHHAQSSG ERVTNDANTL TVETDNMTPH  240
PFPSFGCMPQ DNHHTFLPSF VLENDPFCST ISQTSFFSPN TLESNYLVSP SFHLHDEFDR  300
VFDKPCPDSD AAGIVLADAS TINSPNFDFN FSLDAVGIGA NCPSMPGGSS *
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5w3x_B1e-17116183474Disease resistance protein RRS1
5w3x_D1e-17116183474Disease resistance protein RRS1
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
195103LKQNSKKRK
2100104KKRKK
Cis-element ? help Back to Top
SourceLink
PlantRegMapVang07g06810.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150430.0AP015043.1 Vigna angularis var. angularis DNA, chromosome 10, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_014520499.10.0probable WRKY transcription factor 53
TrEMBLA0A0S3T6T60.0A0A0S3T6T6_PHAAN; Uncharacterized protein
STRINGXP_007158568.11e-174(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF2851133
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11070.11e-45WRKY family protein