PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vang08g00590.2
Organism
Vigna angularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family bZIP
Protein Properties Length: 410aa    MW: 44059.8 Da    PI: 6.6066
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Vang08g00590.2genomeSNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1703.7e-22264326163
                     XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                     e+elkrerrkq+NRe+ArrsR+RK+ae+eeL++kv+ L+aeN +Lk+e+ +l++ ++++++e+
  Vang08g00590.2 264 ERELKRERRKQSNRESARRSRLRKQAETEELARKVEMLTAENVSLKSEITKLTEGSEQMRMEN 326
                     89**********************************************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077773.0E-3112109IPR012900G-box binding protein, multifunctional mosaic region
PfamPF165963.0E-18143211No hitNo description
Gene3DG3DSA:1.20.5.1706.9E-18258323No hitNo description
SMARTSM003382.7E-21264328IPR004827Basic-leucine zipper domain
PfamPF001707.3E-21264326IPR004827Basic-leucine zipper domain
PROSITE profilePS5021713.036266329IPR004827Basic-leucine zipper domain
SuperFamilySSF579594.31E-11267322No hitNo description
CDDcd147027.75E-20269317No hitNo description
PROSITE patternPS000360271286IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009737Biological Processresponse to abscisic acid
GO:0005829Cellular Componentcytosol
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 410 aa     Download sequence    Send to blast
LTRCFSSGDC LMGNSEEGKS VQTGSPSSPA TTDQANQTYQ PNIHVYPDWA AMQYYGPRVN  60
IPPYFNSTVA SGHAPHPFMW GPPQPMMPPY GPPYAAFYPP GGVYTHPAVA IGPHSHGQGV  120
PSPPAAGTPS SVDSPTKLSG NTDQGLMKKL KGFDGLAMSI GNCNAESAEL GAENRLSQSV  180
DTEGSSDGSD GNTAGANQTK MKRSREETST TASIAGKFVG PVISSGMTTA LELRNSLTVH  240
SKENLTSAPQ PCAAVPPEAW IQNERELKRE RRKQSNRESA RRSRLRKQAE TEELARKVEM  300
LTAENVSLKS EITKLTEGSE QMRMENSAMR EKLINTHLGQ REEIILESID SKRSTPVSTE  360
NLLSRVNNSS SNDRSADNES DFCENKPNSG AKLHQLLDTN PRADAVAAG*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1280286RRSRLRK
2280287RRSRLRKQ
Functional Description ? help Back to Top
Source Description
UniProtBinds to the G-box-like motif (5'-ACGTGGC-3') of the chalcone synthase (CHS) gene promoter. G-box and G-box-like motifs are defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00318DAPTransfer from AT2G46270Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapVang08g00590.2
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By light.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankPVU418170.0U41817.1 Phaseolus vulgaris regulator of MAT2 (ROM2) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017410249.10.0PREDICTED: common plant regulatory factor 1-like isoform X1
SwissprotQ990891e-128CPRF1_PETCR; Common plant regulatory factor 1
TrEMBLA0A0S3SYZ00.0A0A0S3SYZ0_PHAAN; Uncharacterized protein
STRINGXP_007135192.10.0(Phaseolus vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46270.12e-92G-box binding factor 3
Publications ? help Back to Top
  1. Weisshaar B,Armstrong GA,Block A,da Costa e Silva O,Hahlbrock K
    Light-inducible and constitutively expressed DNA-binding proteins recognizing a plant promoter element with functional relevance in light responsiveness.
    EMBO J., 1991. 10(7): p. 1777-86
    [PMID:2050115]
  2. Feldbrügge M,Hahlbrock K,Weisshaar B
    The transcriptional regulator CPRF1: expression analysis and gene structure.
    Mol. Gen. Genet., 1996. 251(6): p. 619-27
    [PMID:8757392]