PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vang08g04510.1
Organism
Vigna angularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family ERF
Protein Properties Length: 219aa    MW: 24762.4 Da    PI: 9.6778
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Vang08g04510.1genomeSNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP233.41.1e-1099141251
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaark 51 
                       +GV++ k + +W A I++      +k+++lg+  + eeAa ++++a++
  Vang08g04510.1  99 FMRGVYY-K-NMKWQAAIKVD-----KKQIHLGTVESQEEAAHLYDRAAL 141
                     579**96.5.7*********4.....5*********************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541714.18E-8100144IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.104.2E-7101146IPR001471AP2/ERF domain
PfamPF008471.1E-4101143IPR001471AP2/ERF domain
SMARTSM003803.1E-4101156IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 219 aa     Download sequence    Send to blast
LLCKLKLTMV SLRRRRLLGL CSGNSSFVTP LPLHCEHLTA TEASGQQVQN TIVKDEPGSS  60
NASGSSLSKE DSSQQSLGPP VKRRKQHLRK HAHDKEPCFM RGVYYKNMKW QAAIKVDKKQ  120
IHLGTVESQE EAAHLYDRAA LMCGREPNFE LQEEEKMELC KLKWEDFLAM TRQAIISKKH  180
KRKHSPEAKD VSMEVSVHSD DRKVVNLNQQ TTVSKDLS*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17885PPVKRRKQ
Cis-element ? help Back to Top
SourceLink
PlantRegMapVang08g04510.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150421e-97AP015042.1 Vigna angularis var. angularis DNA, chromosome 9, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017441745.11e-157PREDICTED: ethylene-responsive transcription factor-like protein At4g13040 isoform X1
RefseqXP_017441746.11e-157PREDICTED: ethylene-responsive transcription factor-like protein At4g13040 isoform X1
RefseqXP_017441747.11e-157PREDICTED: ethylene-responsive transcription factor-like protein At4g13040 isoform X1
RefseqXP_017441748.11e-157PREDICTED: ethylene-responsive transcription factor-like protein At4g13040 isoform X1
TrEMBLA0A0S3SW271e-155A0A0S3SW27_PHAAN; Uncharacterized protein
STRINGGLYMA08G46250.41e-69(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF54573253
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13040.14e-43ERF family protein