PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vang08g06590.1
Organism
Vigna angularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family bHLH
Protein Properties Length: 245aa    MW: 27642.1 Da    PI: 6.5131
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Vang08g06590.1genomeSNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH16.12e-05134159530
                     HHHHHHHHHHHHHHHHHHHHCTSCCC CS
             HLH   5 hnerErrRRdriNsafeeLrellPka 30 
                     h ++Er+RR+++ + f  L  l+P +
  Vang08g06590.1 134 HIMAERKRRENLTKMFIALSALIPGL 159
                     999*********************86 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474591.18E-6126160IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS508889.108129183IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.105.4E-6133169IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000834.34E-4134161No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 245 aa     Download sequence    Send to blast
MDQMDDDSWQ QWVSILEEND WHTLRDFDLN SAGEEFKGDN SVVPAEDSLK ESSTTLLSNF  60
PSLEKNTGFD MTSLTQQHDS PRPKSCVLSF ENFTSVPIFD KKTCQHLGEH SKQTQEKTRK  120
PLKRERNSSQ TLDHIMAERK RRENLTKMFI ALSALIPGLK KVEARVAGKD VLIRVTCEMQ  180
RNIVQNVMAK LEAHNLSVVS SNVLPFGNSA ITITSIAQMN PKFTTTVDNF VKXLTEDLSK  240
CCNL*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1137142ERKRRE
Cis-element ? help Back to Top
SourceLink
PlantRegMapVang08g06590.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150420.0AP015042.1 Vigna angularis var. angularis DNA, chromosome 9, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017441944.11e-118PREDICTED: transcription factor bHLH18-like
TrEMBLA0A0L9VU191e-116A0A0L9VU19_PHAAN; Uncharacterized protein
TrEMBLA0A0S3SVJ61e-116A0A0S3SVJ6_PHAAN; Uncharacterized protein
STRINGGLYMA03G25280.11e-80(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF2332324
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22750.22e-15bHLH family protein