PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vang09g01190.1
Organism
Vigna angularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family bHLH
Protein Properties Length: 254aa    MW: 27823.3 Da    PI: 6.3408
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Vang09g01190.1genomeSNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH32.31.8e-10120167455
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +h+ +Er RR++i +++  L++l+P +    +k   Ka +L + ++YI+sLq
  Vang09g01190.1 120 NHSLAERARREKISERMRILQDLVPGC----NKVIGKALVLDEIINYIQSLQ 167
                     79************************9....677*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000837.16E-11114171No hitNo description
SuperFamilySSF474593.79E-18114186IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.9E-18116186IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.675116166IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000109.6E-8120167IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003533.6E-10122172IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 254 aa     Download sequence    Send to blast
MVVCHTHPLT YFITVSCSHL PMDPPLITDS TFSSAYTLAD IWLGTSPFPP SDHHFSENDS  60
GSNKRMKVEG CSVKNDGFKD EAETSSVSGN KSSEQSTVPC EAPKQDYIHV RARRGQATDN  120
HSLAERARRE KISERMRILQ DLVPGCNKVI GKALVLDEII NYIQSLQRQV EFLSMKLEAV  180
NSRMNMSPNT DGFPLKDVGG TGMVFGSQAA TGYAQGSHPG CLHMQIGGGL REHDSEVSQG  240
NETSFDRFVF PLL*
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that forms a ternary complex with RSS3 and TIFY11A/JAZ9 to negatively regulate jasmonate-responsive genes. {ECO:0000269|PubMed:23715469}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapVang09g01190.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0908471e-152BT090847.1 Soybean clone JCVI-FLGm-5B17 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017421292.11e-171PREDICTED: transcription factor bHLH79-like
SwissprotQ69WS36e-66BH094_ORYSJ; Transcription factor BHLH094
TrEMBLA0A0L9UBN81e-170A0A0L9UBN8_PHAAN; Uncharacterized protein
STRINGXP_007138141.11e-136(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF117134105
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G59640.15e-65BIG PETAL P