PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vang09g02270.1
Organism
Vigna angularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family bHLH
Protein Properties Length: 234aa    MW: 26067.1 Da    PI: 11.2782
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Vang09g02270.1genomeSNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH18.43.8e-0630751255
                    HHHHHHHHHHHHHCTSCCC...TTS-..STCHHHHHHHHHHHHHHH CS
             HLH 12 RRdriNsafeeLrellPkaskapskK..lsKaeiLekAveYIksLq 55
                    R ++iN+ +  L+ llP++ ++++ +  +s ++i ++++ +I++Lq
  Vang09g02270.1 30 RESKINDLLLMLKALLPQQNQTSDSRvsVSMMQIIKETCSHISMLQ 75
                    6689**************66566665469999*************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474599.29E-72779IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.7E-63079IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 234 aa     Download sequence    Send to blast
MATHIKVSTI AKLQTFSMSG RRKFRTSKFR ESKINDLLLM LKALLPQQNQ TSDSRVSVSM  60
MQIIKETCSH ISMLQKEVKE LGERVADNNS QTVTRILLGP RHHFLHLLKA RRVTRLFQSV  120
QACLLVRHRR AHPRMHVAHC FVGQRRCGRQ RVVESTQRVV ELVLAVGECT SLRRAERGRE  180
ALERVERGAE REGEDGLGIG GVGGGRDGSE ARGGEARDVA DESDGVGRVG KLL*
Cis-element ? help Back to Top
SourceLink
PlantRegMapVang09g02270.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150350.0AP015035.1 Vigna angularis var. angularis DNA, chromosome 2, almost complete sequence, cultivar: Shumari.
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF106242439