PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vang09g02600.1
Organism
Vigna angularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family MYB_related
Protein Properties Length: 326aa    MW: 35391.4 Da    PI: 5.9425
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Vang09g02600.1genomeSNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding28.73e-0918432148
                     TT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding 21 ggtWktIartmgkgRtlkqcksrwqkyl 48
                      + W++Ia++++  Rt++++k++w++yl
   Vang09g02600.1 18 AR-WSSIAKHLP-MRTDNEIKNYWNSYL 43
                     45.*********.*************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129411.24147IPR017930Myb domain
SuperFamilySSF466896.4E-81551IPR009057Homeodomain-like
PfamPF002491.1E-71743IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.601.0E-121844IPR009057Homeodomain-like
CDDcd001673.78E-71943No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 326 aa     Download sequence    Send to blast
MVDNFLIHCI AFVFLVPARW SSIAKHLPMR TDNEIKNYWN SYLKRHYEKN DAYPSSSKPI  60
STASSTESKS SDLCMVPSKE TDCHGPNATP HQSNQSKLPK TMLSSTQLLN RVASKILSSG  120
YLEAIKSYQH VVAGKSNGDN SVVKTGIEVE KEGNRDPLVP NLTSSNHSVT CSAQLLNKMA  180
TSLPHKVHGL ESAKAVFSKL LESSEKGDSG SDGSFISSDQ IGECLNALSP FEDGPHITNV  240
VGSPSSPSLI FNQVTTPSCF SDNEDNWQNV SSNYVSFRHC APTAAECSVS ELNLGESSSS  300
TSCFLFENTD LGICDDEISK YIQYL*
Cis-element ? help Back to Top
SourceLink
PlantRegMapVang09g02600.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150350.0AP015035.1 Vigna angularis var. angularis DNA, chromosome 2, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017421206.10.0PREDICTED: transcription factor MYB34
TrEMBLA0A0S3RG440.0A0A0S3RG44_PHAAN; Uncharacterized protein
STRINGGLYMA06G21040.11e-139(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF1699968
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08810.22e-10myb domain protein 60