PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vang10g01500.1
Organism
Vigna angularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family bHLH
Protein Properties Length: 217aa    MW: 24137.9 Da    PI: 5.7543
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Vang10g01500.1genomeSNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH20.58.9e-07134161431
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC. CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkas 31 
                     +h+ +Er RR +iN+++  L+ ++P ++
  Vang10g01500.1 134 SHSLAERVRRGKINEKLRCLQNIVPGCY 161
                     8************************974 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000833.29E-4128164No hitNo description
SuperFamilySSF474593.4E-8128167IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088810.391130200IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.107.1E-8133173IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 217 aa     Download sequence    Send to blast
MAEFTADLQS FRPSFPFLDI DNMEIQNLVP FDSLLGSTEP EFPGNLEENF PGLFQCVDHN  60
AVPALNEVHE GKKREATDMG DPSSGNSTPD ISESGSKTKN ICGRGKRVKR NAVEDKKPNQ  120
VVHVRAKRGQ ATDSHSLAER VRRGKINEKL RCLQNIVPGC YKLSAASSYY DFNSESDALE  180
TMQRRKASEA KEIGKYVREG SDEGVSCFEA TWPWYL*
Cis-element ? help Back to Top
SourceLink
PlantRegMapVang10g01500.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150341e-167AP015034.1 Vigna angularis var. angularis DNA, chromosome 1, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017410996.11e-157PREDICTED: transcription factor BEE 3-like
TrEMBLA0A0S3QWQ21e-156A0A0S3QWQ2_PHAAN; Uncharacterized protein
STRINGXP_007160380.11e-126(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF33603467
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G73830.11e-36BR enhanced expression 3