PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vang10g02900.1
Organism
Vigna angularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family TALE
Protein Properties Length: 731aa    MW: 80878.5 Da    PI: 6.8927
Description TALE family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Vang10g02900.1genomeSNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox28.92e-095435801954
                     HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
        Homeobox  19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 
                     Fe   ++yp+ +++  LA+++gL+ +qV++WF N R +
  Vang10g02900.1 543 FEHflHPYPTDTDKHMLATQTGLSRNQVSNWFINARVR 580
                     665559******************************87 PP
2BELL82.36e-274154681972
            BELL  19 VdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 
                     V +rYkqy++q+q+v+ sFe vagl sa+pY+slAlk +S+hFrcLk ai++q+
  Vang10g02900.1 415 VTRRYKQYHQQMQMVVQSFESVAGLSSATPYVSLALKSVSKHFRCLKGAISDQL 468
                     89*************************************************997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM005742.8E-17290466IPR006563POX domain
PfamPF075265.3E-30295465IPR006563POX domain
PROSITE profilePS5007111.985521584IPR001356Homeobox domain
SMARTSM003892.4E-8524588IPR001356Homeobox domain
CDDcd000861.35E-11524585No hitNo description
SuperFamilySSF466897.27E-17526590IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.602.4E-27527588IPR009057Homeodomain-like
PfamPF059203.4E-18541580IPR008422Homeobox KN domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010076Biological Processmaintenance of floral meristem identity
GO:0010077Biological Processmaintenance of inflorescence meristem identity
GO:0010223Biological Processsecondary shoot formation
GO:0010228Biological Processvegetative to reproductive phase transition of meristem
GO:0010229Biological Processinflorescence development
GO:0048645Biological Processorgan formation
GO:0080006Biological Processinternode patterning
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 731 aa     Download sequence    Send to blast
MSSLRPELHV AQQLRRDKLR IQNSSQHLQE FPSNLEQLSL HPGFNLDLLQ VRNVRNGNML  60
DEALYSSDMI SFSTASNPLS TPRNPLECQE LMMAQYGSTS FPHSSSPKDQ QCEPRHLGAN  120
WMVNYNESNP NTNNTTFFSS ELNNNASGEI ANREIQKQFG EMHYPPSSSS SPPLYHNALQ  180
DMSYGVWGGN HAEPVLHYQA NNELRFGGAN LWTNSSSAMG FKKNNEQDIN PHQGLSLSLS  240
SNSQSKPCFE EGSASDDPTQ YSMSLKSSMK LNVLSNNTVY RNVGPLGPFT GYATILKSSR  300
FLKPCQQLLD EWCCQYGSKS AKGGGCDVPE WVSRDVSAAS ISAAATAGDA LNVDESGGAA  360
KGDSAYARTV LLDNLSPVHI PLSESSLFLP QFLNKVFEVL SYPVAIVQIG GLLVVTRRYK  420
QYHQQMQMVV QSFESVAGLS SATPYVSLAL KSVSKHFRCL KGAISDQLKL TCEVLGEEFS  480
MPTTSNGGKF DSNMARLRCM DQSFQKNKSL GANINFLEPQ QHVWRPQRGL PERSVAILKA  540
WLFEHFLHPY PTDTDKHMLA TQTGLSRNQV SNWFINARVR VWKPMVEEIH MLETKGATEA  600
HQASNKSEQV ASASEGSNQP KSDHQPVSRY GTHASSSAGN EEHIGMNEDQ WNQEKRSKLE  660
CQIAATPNMD GTVMGFMPYR RGGLEVGGLG SVSLTLGLRH SVEGVQQQQL QQQEELRRQF  720
GGHMIHDFVG *
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3k2a_A7e-15530588563Homeobox protein Meis2
3k2a_B7e-15530588563Homeobox protein Meis2
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapVang10g02900.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150390.0AP015039.1 Vigna angularis var. angularis DNA, chromosome 6, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017409420.10.0PREDICTED: BEL1-like homeodomain protein 8
RefseqXP_017409421.10.0PREDICTED: BEL1-like homeodomain protein 8
TrEMBLA0A0L9TE900.0A0A0L9TE90_PHAAN; Uncharacterized protein
TrEMBLA0A0S3SCG30.0A0A0S3SCG3_PHAAN; Uncharacterized protein
STRINGXP_007132286.10.0(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF34813257
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36870.24e-63BEL1-like homeodomain 2