PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Vang11g02130.3

Common Name

LR48_Vigan01g153600

Organism

Vigna angularis

Taxonomic ID

3914

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna

Family

G2-like

Protein Properties

Length: 136aa MW: 14603.8 Da PI: 4.8841

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Vang11g02130.3	genome	SNU	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	20.6	9.7e-07	1	16	36	51
G2-like 36 mkvkgLtlehvkSHLQ 51 m+vk+Ltl+hvkSHLQ Vang11g02130.3 1 MDVKDLTLAHVKSHLQ 16 9*************** PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.10.10.60	5.4E-5	1	16	IPR009057	Homeodomain-like

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0009944	Biological Process	polarity specification of adaxial/abaxial axis
GO:0048481	Biological Process	plant ovule development
GO:0005634	Cellular Component	nucleus
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 136 aa Download sequence Send to blast
MDVKDLTLAH VKSHLQVISN LRQSDTYDNG SSGDTSEDLV FDRNSPRRSD LSIRQARTSV 60 NQDIGNGGLW NNSSRQAFLH GKPNLDSIGN VPSAEGMDPK GQSNEISDGN SSSDIAESSG 120 KKLNLDLEFT LGRSL*

Binding Motif ? help Back to Top
Motif ID	Method	Source	Motif file
MP00174	DAP	Transfer from AT1G32240	Download

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Vang11g02130.3

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	Retrieve

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	AP015034	3e-84	AP015034.1 Vigna angularis var. angularis DNA, chromosome 1, almost complete sequence, cultivar: Shumari.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_017408097.1	9e-84	PREDICTED: probable transcription factor KAN2 isoform X2
TrEMBL	A0A0L9TN65	2e-80	A0A0L9TN65_PHAAN; Uncharacterized protein
TrEMBL	A0A0S3R3E8	2e-80	A0A0S3R3E8_PHAAN; Uncharacterized protein
STRING	XP_007156399.1	8e-55	(Phaseolus vulgaris)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G32240.1	5e-21	G2-like family protein

Publications ? help Back to Top
Yang K, et al. Genome sequencing of adzuki bean (Vigna angularis) provides insight into high starch and low fat accumulation and domestication. Proc. Natl. Acad. Sci. U.S.A., 2015. 112(43): p. 13213-8 [PMID:26460024]