PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vang11g04850.1
Common NameLR48_Vigan01g199600
Organism
Vigna angularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family bZIP
Protein Properties Length: 172aa    MW: 19917.6 Da    PI: 10.1171
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Vang11g04850.1genomeSNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_131.34.3e-1066125564
                     CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC CS
          bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkseve 64 
                     ++ rr+++NRe+ArrsR RK+  +e+L++   +   eN++L ++l+    ++ +l++e+e
  Vang11g04850.1  66 RKLRRMISNRESARRSRMRKQRHLENLRNQLNKCRVENRELNNRLQFVLHHCNRLRTENE 125
                     6789************************************************99999885 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.3E-1162126IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.03664127IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1706.6E-964121No hitNo description
PfamPF001701.2E-766125IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.41E-1066118No hitNo description
CDDcd147021.03E-1767118No hitNo description
PROSITE patternPS0003606984IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 172 aa     Download sequence    Send to blast
MLTTLPPSEP FVGNPFSAFS VDFTAWEDDS HHLLSPKPVT SSSGSDKPEP EPAEPDQPVV  60
SVVDERKLRR MISNRESARR SRMRKQRHLE NLRNQLNKCR VENRELNNRL QFVLHHCNRL  120
RTENEWLRSQ RTLLLQKVAN LTQILIFQQF QQPISPAWTC NTSLIPINQV N*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17885RRSRMRKQ
Cis-element ? help Back to Top
SourceLink
PlantRegMapVang11g04850.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150340.0AP015034.1 Vigna angularis var. angularis DNA, chromosome 1, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017432833.11e-122PREDICTED: bZIP transcription factor 2-like
TrEMBLA0A0L9TPH81e-121A0A0L9TPH8_PHAAN; Uncharacterized protein
TrEMBLA0A0S3R4W81e-121A0A0S3R4W8_PHAAN; Uncharacterized protein
STRINGXP_007155805.11e-107(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF54353254
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G49760.14e-26basic leucine-zipper 5
Publications ? help Back to Top
  1. Yang K, et al.
    Genome sequencing of adzuki bean (Vigna angularis) provides insight into high starch and low fat accumulation and domestication.
    Proc. Natl. Acad. Sci. U.S.A., 2015. 112(43): p. 13213-8
    [PMID:26460024]