PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vang11g11810.1
Organism
Vigna angularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family WRKY
Protein Properties Length: 400aa    MW: 43873.3 Da    PI: 9.6605
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Vang11g11810.1genomeSNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY79.53.7e-25193249259
                     --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                     +DgynWrKYGqK+vk+ + +rsYYrCt+++C++kk +e++++ ++v+ei+Y++eH h+
  Vang11g11810.1 193 SDGYNWRKYGQKQVKSPTGSRSYYRCTHSDCCAKK-IECCDHSGHVIEIVYKSEHSHD 249
                     7********************************98.*********************7 PP
2WRKY33.67.9e-11366386323
                     -SS-EEEEEEE--TT-SS-EE CS
            WRKY   3 DgynWrKYGqKevkgsefprs 23 
                     Dgy+WrKYGqK+vkg+ +pr 
  Vang11g11810.1 366 DGYRWRKYGQKMVKGNLHPRC 386
                     9******************84 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.802.2E-21186251IPR003657WRKY domain
PROSITE profilePS5081118.119187251IPR003657WRKY domain
SuperFamilySSF1182901.96E-20190251IPR003657WRKY domain
SMARTSM007747.6E-24192250IPR003657WRKY domain
PfamPF031061.7E-17194249IPR003657WRKY domain
Gene3DG3DSA:2.20.25.802.1E-10349386IPR003657WRKY domain
PROSITE profilePS5081112.277359389IPR003657WRKY domain
SuperFamilySSF1182904.32E-9360392IPR003657WRKY domain
SMARTSM007746.5E-4364399IPR003657WRKY domain
PfamPF031063.4E-7366387IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 400 aa     Download sequence    Send to blast
MAERRSPQAL PDPNPEPNDS DRKPHDANQT QRLTESPSPA ELQRRELRSF GERRTESNLE  60
TLGGAVTSSV QTLAVQHHRS DDLHGSSVAS NSSGKAESKE TDAPPEKEII QGEAQPLPTQ  120
TNRLQLSVCS TPLSELPPTS VIHSSTSVSS PTVPKQKLSS PKVNNARLPE VDKKSSSGGK  180
TLSAVSVARS SASDGYNWRK YGQKQVKSPT GSRSYYRCTH SDCCAKKIEC CDHSGHVIEI  240
VYKSEHSHDP PRKINSLREN KILSASQPIV EKSIPDQPVR LMKDPDPSIS SKESLQEAPC  300
STDKKRPNSS SMSNGKVILK EEPVNEPEPK KRMKKGDLTD MDSPVKPGKK PKFVIHAAGD  360
VGISGDGYRW RKYGQKMVKG NLHPRCMSKY CLLSVFFSF*
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element. {ECO:0000250|UniProtKB:Q9SI37}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapVang11g11810.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150340.0AP015034.1 Vigna angularis var. angularis DNA, chromosome 1, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017440059.10.0PREDICTED: probable WRKY transcription factor 32
SwissprotP595834e-69WRK32_ARATH; Probable WRKY transcription factor 32
TrEMBLA0A0S3R6P10.0A0A0S3R6P1_PHAAN; Uncharacterized protein
STRINGXP_007154886.10.0(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF51983456
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G30935.19e-61WRKY DNA-binding protein 32