PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vang11g14720.1
Organism
Vigna angularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family ERF
Protein Properties Length: 229aa    MW: 24978.3 Da    PI: 10.323
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Vang11g14720.1genomeSNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP225.43.4e-08122141222
             AP2   2 gykGVrwdkkrgrWvAeIrdp 22 
                      y+GVr+++ +g+WvAeIr p
  Vang11g14720.1 122 LYRGVRQRH-WGKWVAEIRLP 141
                     59******9.*********97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.101.9E-9122143IPR001471AP2/ERF domain
PROSITE profilePS5103210.02122223IPR001471AP2/ERF domain
SMARTSM003800.0038122172IPR001471AP2/ERF domain
SuperFamilySSF541717.85E-5122142IPR016177DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 229 aa     Download sequence    Send to blast
MQERNSQLGT DIGSSLSKLI LTSGSNTLDS IFSDCPPTNA ASSNSVLDYL EPFGSSGFEP  60
LGSSVYLRQK DILQKFYQES RGNGNGNGNG SLLPTSLANP SINSLYTASL TSSLTNPSKK  120
KLYRGVRQRH WGKWVAEIRL PQKLDFPNLK DPTKLGFGDS ARLNALKSSV DAKIQAICQK  180
VKRERAKKIA AKKLSSATAH ATRKESEKIN SSTEYTFVQI NFKCQCHV*
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapVang11g14720.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150340.0AP015034.1 Vigna angularis var. angularis DNA, chromosome 1, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017407212.11e-130PREDICTED: ethylene-responsive transcription factor ERF061
SwissprotQ9C7W22e-42ERF61_ARATH; Ethylene-responsive transcription factor ERF061
TrEMBLA0A0L9T9851e-129A0A0L9T985_PHAAN; Uncharacterized protein
TrEMBLA0A0S3T6031e-129A0A0S3T603_PHAAN; Uncharacterized protein
STRINGXP_007158572.11e-120(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF71813148
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G64380.14e-35ERF family protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]