PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vang1880s00010.1
Organism
Vigna angularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family WRKY
Protein Properties Length: 76aa    MW: 8841.97 Da    PI: 9.4703
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Vang1880s00010.1genomeSNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY43.85.1e-1416621659
                      TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
              WRKY 16 kgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59
                      k ++  r+YYrCt++   +C+++k+v+r +e+p + ++tY g+H+++
  Vang1880s00010.1 16 KPNTQGRNYYRCTHKydqNCQATKQVQRIQENPPLYKTTYFGQHTCN 62
                      678899********9999***************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5081111.1871259IPR003657WRKY domain
SMARTSM007749.1E-121463IPR003657WRKY domain
SuperFamilySSF1182901.7E-141562IPR003657WRKY domain
Gene3DG3DSA:2.20.25.805.8E-141562IPR003657WRKY domain
PfamPF031063.5E-141662IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 76 aa     Download sequence    Send to blast
LMAISGESMA KKRSSKPNTQ GRNYYRCTHK YDQNCQATKQ VQRIQENPPL YKTTYFGQHT  60
CNDLLNHFET SVFYM*
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor involved in senescence, biotic and abiotic stress responses by modulating various phytohormones signaling pathways (By similarity). Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). Required for the resistance (R) gene Mi-1-mediated resistance to potato aphid (e.g. M.euphorbiae) and root-knot nematode (e.g. M.javanica) (PubMed:21898085). {ECO:0000250|UniProtKB:Q9LY00, ECO:0000250|UniProtKB:Q9SUP6, ECO:0000269|PubMed:21898085}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapVang1880s00010.1
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced in response to potato aphid (e.g. M.euphorbiae) infestation and root-knot nematode (e.g. M.javanica) inoculation. Up-regulated by salicylic acid (SA) and suppressed by methyl jasmonate (MeJA). {ECO:0000269|PubMed:21898085}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150429e-68AP015042.1 Vigna angularis var. angularis DNA, chromosome 9, almost complete sequence, cultivar: Shumari.
GenBankBT0956459e-68BT095645.1 Soybean clone JCVI-FLGm-15G11 unknown mRNA.
GenBankKT0312299e-68KT031229.1 Glycine max clone HN_CCL_115 WRKY transcription factor (Glyma03g00460.1) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017441361.12e-25PREDICTED: probable WRKY transcription factor 62
SwissprotK4BIZ93e-15WRK70_SOLLC; WRKY DNA-binding transcription factor 70
TrEMBLA0A0L9VUT45e-24A0A0L9VUT4_PHAAN; Uncharacterized protein
STRINGXP_007134564.17e-24(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF19953486
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66550.22e-17WRKY DNA-binding protein 67
Publications ? help Back to Top
  1. Tomato Genome Consortium
    The tomato genome sequence provides insights into fleshy fruit evolution.
    Nature, 2012. 485(7400): p. 635-41
    [PMID:22660326]