PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vocar.0016s0211.1.p
Organism
Volvox carteri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Volvocaceae; Volvox
Family bZIP
Protein Properties Length: 331aa    MW: 35728.6 Da    PI: 10.5386
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Vocar.0016s0211.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_123.41.3e-071832331060
                          HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
               bZIP_1  10 kqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklk 60 
                          k+kNR A+rr+R+R k  i++L+++v+ L++   +  ke+  lk+e a l+
  Vocar.0016s0211.1.p 183 KEKNRQAQRRFRERQKDLIANLKQRVEDLQSRVAESEKEIIALKEENAMLR 233
                          79*******************************9999*******9998775 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003380.004177238IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.38E-9183234No hitNo description
PROSITE patternPS000360183196IPR004827Basic-leucine zipper domain
CDDcd146862.35E-10183230No hitNo description
Gene3DG3DSA:1.20.5.1702.0E-9183234No hitNo description
PROSITE profilePS502178.623183233IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 331 aa     Download sequence    Send to blast
MDGLGQLFIA QNGSVYALVP AESREPPPRH VRAESEVTAL LTQILQRQQH QQQQQQQQQQ  60
QQQLHEQHLR QQHLALQLDG LAAPNPAQHR EEALHSLLQA TLIQSYPHQI QSNLSPNPGP  120
STSTHLGASG QMPMQRRRLP SVESPSNSGR SDSQSPPPSN RGVDRSERSN QNGLGLSAQM  180
SAKEKNRQAQ RRFRERQKDL IANLKQRVED LQSRVAESEK EIIALKEENA MLRGRIEGKQ  240
QGPSVTLPAE TLQSLLQMTG ASGLLADAPR PRSGGSGGAS IVAGSNGGSA AAVYGPIRGG  300
DMNTRGGDAG VRGSDTGRRG DLGLRRGEVE *
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
ChlorophytaeOGCP793645