PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vradi0007s01710.1
Organism
Vigna radiata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family G2-like
Protein Properties Length: 253aa    MW: 27930.3 Da    PI: 9.7241
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Vradi0007s01710.1genomeSNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like38.13.5e-124670125
            G2-like  1 kprlrWtpeLHerFveaveqLGGse 25
                       k+rlrWt++LH+rFv+a++qLGG++
  Vradi0007s01710.1 46 KQRLRWTSDLHDRFVDAITQLGGPD 70
                       79*********************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.601.8E-104472IPR009057Homeodomain-like
TIGRFAMsTIGR015571.5E-84671IPR006447Myb domain, plants
PfamPF143798.4E-25109155IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 253 aa     Download sequence    Send to blast
MYHAKKFSSA SMVPYKSQGG AEQIANVEVL GGSAGKNATP SGGSGKQRLR WTSDLHDRFV  60
DAITQLGGPD SGKRRDNFSF GYLQSKTLKM RRGILETAFL AQILLRGGMP INDALRMQME  120
VQKRLHEQLE VQKQLQMRIE AQGKYLQKII EEQQKLGNTL TTSETLPLSH DKQSHPHSEA  180
SGSSDALAST LSPRKKQRID DGSKDGFTAS HVRKTEQKNE CNVGQLVPNL YDDAGFGFNL  240
ETNKDEHKES GQ*
Cis-element ? help Back to Top
SourceLink
PlantRegMapVradi0007s01710.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150370.0AP015037.1 Vigna angularis var. angularis DNA, chromosome 4, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_014491019.11e-152myb family transcription factor PHL7 isoform X2
TrEMBLA0A1S3TB721e-151A0A1S3TB72_VIGRR; myb family transcription factor PHL7 isoform X2
STRINGXP_007161823.11e-135(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF130132330
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01060.12e-35G2-like family protein