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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Vradi03g07950.1 |
| Organism |
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| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
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| Family |
GRAS |
| Protein Properties |
Length: 468aa MW: 51225.3 Da PI: 5.6707 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Vradi03g07950.1 | genome | SNU | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 460.8 | 8e-141 | 97 | 461 | 1 | 374 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfs 94
lv++L++cAeav++++l+la+al++++ las+++ +m+++a+yf++ALa+r+++ + p+et +++ s+ l++ f+e +P+lkf+
Vradi03g07950.1 97 LVHTLMACAEAVQQENLKLADALVKHVGILASSQAGAMRKVASYFAQALARRIYG--------IFPEETLDSSFSDLLHM--HFYESCPYLKFA 180
689****************************************************........33444444556666665..5*********** PP
GRAS 95 hltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrled 188
h+taNqaIlea+ ++ rvH+iDf+++qG+QWpaL+qaLa Rp+gpp++R+Tg+g+p+++++++l+++g++La++A+++gv+fef+ +v+++l+d
Vradi03g07950.1 181 HFTANQAILEAFTTAGRVHVIDFGLKQGMQWPALMQALALRPGGPPTFRLTGIGPPQPDNTDALQQVGWKLAQLAHTIGVQFEFRGFVCSSLAD 274
********************************************************************************************** PP
GRAS 189 leleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpres... 279
l++++L+++ gEa+aVn+v++lhr+l++++s+++ v+++vk+l+Pk+v++veqea+hn++ Fl+rf+eal+yys+lfdsle + ++
Vradi03g07950.1 275 LDPNMLEIRAGEAVAVNSVFELHRMLARPGSVDK----VMDTVKKLNPKIVTIVEQEANHNGPVFLDRFTEALHYYSSLFDSLEGSSTSNGlgs 364
**************************99999999....*********************************************88854444677 PP
GRAS 280 .eerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvS 371
+++ +++ +lg++i+nvva eg er+erhetl++Wr r+++aGF pv+l+++a kqa++ll+ ++ +dgyrvee++g+l+lgW++rpL+++S
Vradi03g07950.1 365 pNQDLLMSELYLGKQICNVVAYEGVERVERHETLSQWRGRMGSAGFDPVHLGSNAFKQASMLLALFAgGDGYRVEENNGCLMLGWHTRPLIATS 458
999******************************************************************************************* PP
GRAS 372 aWr 374
aW+
Vradi03g07950.1 459 AWK 461
**8 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 468 aa
Download sequence Send
to blast |
MPNGKAKMWE EDRHQQGGGM DELLAALGYK VRASDMADVA QKLEQLEMVM GSAQEEGISH 60
LASDTVHYDP TDLHSWSASE PTRPVVLVDS QEAGVRLVHT LMACAEAVQQ ENLKLADALV 120
KHVGILASSQ AGAMRKVASY FAQALARRIY GIFPEETLDS SFSDLLHMHF YESCPYLKFA 180
HFTANQAILE AFTTAGRVHV IDFGLKQGMQ WPALMQALAL RPGGPPTFRL TGIGPPQPDN 240
TDALQQVGWK LAQLAHTIGV QFEFRGFVCS SLADLDPNML EIRAGEAVAV NSVFELHRML 300
ARPGSVDKVM DTVKKLNPKI VTIVEQEANH NGPVFLDRFT EALHYYSSLF DSLEGSSTSN 360
GLGSPNQDLL MSELYLGKQI CNVVAYEGVE RVERHETLSQ WRGRMGSAGF DPVHLGSNAF 420
KQASMLLALF AGGDGYRVEE NNGCLMLGWH TRPLIATSAW KLPAPES*
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| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcriptional regulator that acts as a repressor of the gibberellin (GA) signaling pathway. Probably acts by participating in large multiprotein complexes that represses transcription of GA-inducible genes. Upon GA application, it is degraded by the proteasome, allowing the GA signaling pathway (By similarity). {ECO:0000250}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AP015037 | 0.0 | AP015037.1 Vigna angularis var. angularis DNA, chromosome 4, almost complete sequence, cultivar: Shumari. |
