PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vradi07g01500.1
Organism
Vigna radiata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family bZIP
Protein Properties Length: 199aa    MW: 22345.1 Da    PI: 10.8694
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Vradi07g01500.1genomeSNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_123.41.3e-07126149528
                      CHHHCHHHHHHHHHHHHHHHHHHH CS
           bZIP_1   5 krerrkqkNReAArrsRqRKkaei 28 
                       r  r++kNRe+A rsR+RK++ i
  Vradi07g01500.1 126 MRDARLMKNRESAARSRARKQENI 149
                      5788*****************987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1706.5E-7122188No hitNo description
CDDcd147075.99E-13126188No hitNo description
PROSITE patternPS000360130144IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 199 aa     Download sequence    Send to blast
MLSSSSINTT TTTCNRNNLN HQTPTTNNTT NNKAMEDVWD GINLTSLSGH NSDTTPTSKG  60
ANFQDFLARP FNSFTVDTSP VTALTLSTCS EYPPRQKDLQ LVHNASKTEP FAHPFSNKRA  120
PPSRDMRDAR LMKNRESAAR SRARKQENIA SSSTLSFRVS PLFRAYLFEL KQKIKQLREE  180
NARLRKQQQL VPLFPLSL*
Cis-element ? help Back to Top
SourceLink
PlantRegMapVradi07g01500.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150340.0AP015034.1 Vigna angularis var. angularis DNA, chromosome 1, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_022640134.13e-98bZIP transcription factor 27-like isoform X2
TrEMBLA0A3Q0FBY68e-97A0A3Q0FBY6_VIGRR; bZIP transcription factor 27-like isoform X2
STRINGXP_007156193.15e-60(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF1699577
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17770.23e-13basic region/leucine zipper motif 27