PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vun000075
Organism
Vigna unguiculata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family bZIP
Protein Properties Length: 324aa    MW: 35249.7 Da    PI: 5.5249
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Vun#S45919984PU_unrefUnigeneView CDS
gnl|UG|Vun#S45919985PU_unrefUnigeneView CDS
gnl|UG|Vun#S45931036PU_unrefUnigeneView CDS
PUT-167a-Vigna_unguiculata-11236PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_149.11.3e-15244305162
                XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
     bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 
                +ke+kr +r+ +NR++A+  R+RKka++  Le++vk Le++N++Lk++l++l++e + l++ 
  Vun000075 244 DKESKRLKRLLRNRVSAQQARERKKAYLIDLETRVKDLEKKNSELKERLSTLQNENQMLRQI 305
                689******************************************************99876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF578501.08E-3132117No hitNo description
Gene3DG3DSA:3.30.40.106.5E-3033122IPR013083Zinc finger, RING/FYVE/PHD-type
PfamPF145696.4E-3638114IPR027934Cellulose synthase, RING-type zinc finger
PROSITE profilePS500899.2294894IPR001841Zinc finger, RING-type
SMARTSM003385.0E-17244308IPR004827Basic-leucine zipper domain
PfamPF001705.7E-14245306IPR004827Basic-leucine zipper domain
PROSITE profilePS5021712.702246309IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.6E-16248308No hitNo description
SuperFamilySSF579595.31E-13248306No hitNo description
CDDcd147044.94E-21249300No hitNo description
PROSITE patternPS000360251266IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0005515Molecular Functionprotein binding
GO:0008270Molecular Functionzinc ion binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 324 aa     Download sequence    Send to blast
DGLVKVFKKM ERSGGMVTGS HERNELVRVR HGSDSGSKPL KNLNGKICQI CGDTIGLTAT  60
GDVFVACHEC GFPLCHSCYE YELKNVSQSC PQCKTRFTSQ QEGAGVEGDD DDEEDADDLD  120
NEINYGQENN SKAGMQWEED ADFSSSSGHD SQIPNPHLPN GQPMSGDIPC ATSEAQSMQT  180
TSGPMATTKQ PGPESDEEIR RVPEIGGESA GTAASRPDGG SNAGAERAQG TGEGQKKRGR  240
SPADKESKRL KRLLRNRVSA QQARERKKAY LIDLETRVKD LEKKNSELKE RLSTLQNENQ  300
MLRQILKNTT ASRRGSNSGT NNAE
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1weo_A4e-263597668cellulose synthase, catalytic subunit (IRX3)
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_027930479.10.0cellulose synthase A catalytic subunit 1 [UDP-forming]-like
TrEMBLA0A4D6KRQ40.0A0A4D6KRQ4_VIGUN; Cellulose synthase A
STRINGXP_007146305.10.0(Phaseolus vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11260.11e-56bZIP family protein