PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vun001235
Organism
Vigna unguiculata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family G2-like
Protein Properties Length: 388aa    MW: 43182.5 Da    PI: 7.9951
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Vun#S45933724PU_unrefUnigeneView CDS
PUT-167a-Vigna_unguiculata-17899PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like102.62.5e-32243298156
    G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 
                k+r++W+peLH+rFv+a++qLGG+++AtPk+i+elm+v++Lt+++vkSHLQkYRl+
  Vun001235 243 KQRRCWSPELHRRFVDALQQLGGAQVATPKQIRELMQVESLTNDEVKSHLQKYRLH 298
                79****************************************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129414.207240300IPR017930Myb domain
Gene3DG3DSA:1.10.10.602.7E-29241301IPR009057Homeodomain-like
SuperFamilySSF466893.84E-18241301IPR009057Homeodomain-like
TIGRFAMsTIGR015571.3E-26243298IPR006447Myb domain, plants
PfamPF002492.9E-7245296IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 388 aa     Download sequence    Send to blast
RDIFLRYHLK SGYGMVVCDL WEHTAHRKSP NPTQQHPSAF MELSLDLSLG FVPKPISLFF  60
ADVSGNRDKT DKVATLDGFV QRLEDELRKV EAFKRELPLC MLLLNDAIAR LKEEKVKCSV  120
LQDLPTSEQF VPPKTTSGES ENEKCEKKNW MSSAQLWSTQ KIKSRNEEGD RSVPENPINA  180
NLCAPRKEGS QIPSFSLMGH ASELSHSNSK SVCGDTSSGS SLLRVEVQSQ PQPPQHMQQN  240
PRKQRRCWSP ELHRRFVDAL QQLGGAQVAT PKQIRELMQV ESLTNDEVKS HLQKYRLHVR  300
RFPVSSVGQA DNGSWMGQDQ CGDKSKGNLS QSGSPQGPLT PLLLGGGGSA KGISSPGRNS  360
VDAEDEQSDC RNWKGGLHQH LEADNHSL
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_027908273.10.0transcription factor HHO5-like
TrEMBLA0A4D6LS280.0A0A4D6LS28_VIGUN; Two-component response regulator ARR-B family
STRINGXP_007156835.10.0(Phaseolus vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37180.15e-57G2-like family protein