PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vun001407
Organism
Vigna unguiculata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family ERF
Protein Properties Length: 372aa    MW: 41580.2 Da    PI: 4.6197
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Vun#S45808035PU_unrefUnigeneView CDS
PUT-167a-Vigna_unguiculata-5585PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.96.1e-19117166255
        AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                +y+G+r+++ +g+W+AeIrdp++     r++lg+f taeeAa+a++a +++++g
  Vun001407 117 QYRGIRQRP-WGKWAAEIRDPRK---GVRVWLGTFSTAEEAARAYDAEARRIRG 166
                69*******.**********954...4************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000184.19E-33117175No hitNo description
Gene3DG3DSA:3.30.730.101.3E-32117175IPR001471AP2/ERF domain
SMARTSM003806.7E-38117180IPR001471AP2/ERF domain
PROSITE profilePS5103224.118117174IPR001471AP2/ERF domain
SuperFamilySSF541714.64E-22117175IPR016177DNA-binding domain
PfamPF008471.2E-11118166IPR001471AP2/ERF domain
PRINTSPR003671.2E-11118129IPR001471AP2/ERF domain
PRINTSPR003671.2E-11140156IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 372 aa     Download sequence    Send to blast
MCGGAIISDF IPAGPAGRSR RVTPDILWPN LRKRFSKPLL DDDFEAGFRE FKDDSEIEDD  60
DDEDEEEDLM MAGVKKPVGF SRPNKTSKSL SPGSTTVKSV ESKGQAEKCA KRKRKNQYRG  120
IRQRPWGKWA AEIRDPRKGV RVWLGTFSTA EEAARAYDAE ARRIRGKKAK VNFPDEPSAV  180
SSKRLKVIPE ENLKPKMNQL FNFGDNMEEY YNQVEQKPVV NQYVNPGSFT GNCVQFSPVT  240
QSTDVTAYFS SEHSSNSFDY SDLGWGEQVP RTPEISSMLS ATLEGESQFV QDQIQKKDSE  300
NMMPVQDDSA KTLSEELADI ESQLKFFEAP LFDGSWGDAS LASLLGTDAT QDAGNPLNLW  360
SFDDLPSMAG VF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A3e-21117174260ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
5wx9_A1e-201161761374Ethylene-responsive transcription factor ERF096
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_027906525.10.0ethylene-responsive transcription factor RAP2-12-like
TrEMBLA0A4D6MMX30.0A0A4D6MMX3_VIGUN; EREBP-like factor
STRINGXP_007135380.10.0(Phaseolus vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G53910.24e-58related to AP2 12