PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Vun001425

Organism

Vigna unguiculata

Taxonomic ID

3917

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna

Family

bZIP

Protein Properties

Length: 370aa MW: 41544.4 Da PI: 7.5468

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PUT-167a-Vigna_unguiculata-12405	PU_ref	plantGDB	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	51.1	3e-16	209	263	3	57
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57 + kr rr+ +NRe+ArrsR+RK+a + eLe+ v +L +eN++L k+l ++ + Vun001425 209 DAKRVRRMLSNRESARRSRRRKQAHLTELETQVSQLRGENSSLLKRLTDVSQRYN 263 579*****************************************99988877765 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	1.8E-18	207	271	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	11.542	209	263	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	4.5E-14	210	261	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	5.9E-13	211	262	No hit	No description
SuperFamily	SSF57959	6.51E-12	211	261	No hit	No description
CDD	cd14702	3.01E-6	212	263	No hit	No description
PROSITE pattern	PS00036	0	214	229	IPR004827	Basic-leucine zipper domain
Pfam	PF12498	1.4E-24	278	337	IPR020983	Basic leucine-zipper, C-terminal

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 370 aa Download sequence Send to blast
MERVLSVDEI SEQYWVAAKK ESCKSKSKMN RSESEWAFQQ FLQEAASPSS SSSSDVKPEK 60 DPDINMNITL NVDSHDYQTI LKTKLNLACA AVALTRVSYF FAFFFNVLXL FTISSFLKVF 120 PSLYLMFSSR DLWSNLKIRP XFPDSGSVPS EVGALKDVKG ATGICFSPFL QKKGVVAVRP 180 TMSGSSREQS EDEEAEEEIN MTGNMNPTDA KRVRRMLSNR ESARRSRRRK QAHLTELETQ 240 VSQLRGENSS LLKRLTDVSQ RYNSASIDNR VLKADVETLR AKVKMAEETV KRISGLNPMF 300 HAMTEMSSME IPLFDESPSD TSAGAAVPVQ EDPNHQLCQA TGGANSLHRV ASLEHLQKRI 360 RGDEDSRQEQ

Sequence ? help Back to Top

Protein Sequence Length: 370 aa Download sequence Send to blast

MERVLSVDEI SEQYWVAAKK ESCKSKSKMN RSESEWAFQQ FLQEAASPSS SSSSDVKPEK  60
DPDINMNITL NVDSHDYQTI LKTKLNLACA AVALTRVSYF FAFFFNVLXL FTISSFLKVF  120
PSLYLMFSSR DLWSNLKIRP XFPDSGSVPS EVGALKDVKG ATGICFSPFL QKKGVVAVRP  180
TMSGSSREQS EDEEAEEEIN MTGNMNPTDA KRVRRMLSNR ESARRSRRRK QAHLTELETQ  240
VSQLRGENSS LLKRLTDVSQ RYNSASIDNR VLKADVETLR AKVKMAEETV KRISGLNPMF  300
HAMTEMSSME IPLFDESPSD TSAGAAVPVQ EDPNHQLCQA TGGANSLHRV ASLEHLQKRI  360
RGDEDSRQEQ

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	223	230	RRSRRRKQ
2	225	230	SRRRKQ

Functional Description ? help Back to Top
Source	Description
UniProt	Binds to the G-box-like motif (5'-ACGTGGC-3') of the chalcone synthase (CHS) gene promoter. G-box and G-box-like motifs are defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_027930704.1	0.0	light-inducible protein CPRF2 isoform X1
Swissprot	Q99090	2e-83	CPRF2_PETCR; Light-inducible protein CPRF2
TrEMBL	A0A4D6KLW9	0.0	A0A4D6KLW9_VIGUN; Extracellular signal-regulated kinase 1/2
STRING	XP_007147170.1	1e-167	(Phaseolus vulgaris)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28770.2	4e-60	bZIP family protein

Publications ? help Back to Top
Weisshaar B,Armstrong GA,Block A,da Costa e Silva O,Hahlbrock K Light-inducible and constitutively expressed DNA-binding proteins recognizing a plant promoter element with functional relevance in light responsiveness. EMBO J., 1991. 10(7): p. 1777-86 [PMID:2050115]