PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Vun001785

Organism

Vigna unguiculata

Taxonomic ID

3917

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna

Family

Dof

Protein Properties

Length: 342aa MW: 37357.8 Da PI: 7.1286

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PUT-167a-Vigna_unguiculata-13403	PU_ref	plantGDB	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	127.7	3.4e-40	53	113	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 +++alkcprCdst+tkfCyynnyslsqPryfCk+CrryWtkGG+lrn+PvGgg+rknkk+s Vun001785 53 HDQALKCPRCDSTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKKVS 113 6899******************************************************975 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
ProDom	PD007478	1.0E-28	47	107	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	1.1E-33	54	111	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	29.189	57	111	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	59	95	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 342 aa Download sequence Send to blast
MGLSSLHVCM DSSDHWLQGT IHEESGMDSS SSPSGDMLTC SRPMIERRLR PPHDQALKCP 60 RCDSTHTKFC YYNNYSLSQP RYFCKTCRRY WTKGGTLRNI PVGGGCRKNK KVSAKKSNDH 120 QLVNNQISQT QPPPSSYHHN PKDLQLSFPD VQFSHLSNLL GTHNAGALGG NPSFMEGKYG 180 IGMIENPRPI DFMMESKLEG IIGSSSSRNF DFFGNTDMAM GGAGLGDMHG NAQNGLPPNF 240 HALCPSAFGG MSMSLDANTT TNGAANNYLM DSCQRLMLPY DATEDHNASI DVKPNPKQLL 300 SLEWQDQGCS DAGKDSFGYL NGPGSWTGMM NGYGSSTTNP LV

Sequence ? help Back to Top

Protein Sequence Length: 342 aa Download sequence Send to blast

MGLSSLHVCM DSSDHWLQGT IHEESGMDSS SSPSGDMLTC SRPMIERRLR PPHDQALKCP  60
RCDSTHTKFC YYNNYSLSQP RYFCKTCRRY WTKGGTLRNI PVGGGCRKNK KVSAKKSNDH  120
QLVNNQISQT QPPPSSYHHN PKDLQLSFPD VQFSHLSNLL GTHNAGALGG NPSFMEGKYG  180
IGMIENPRPI DFMMESKLEG IIGSSSSRNF DFFGNTDMAM GGAGLGDMHG NAQNGLPPNF  240
HALCPSAFGG MSMSLDANTT TNGAANNYLM DSCQRLMLPY DATEDHNASI DVKPNPKQLL  300
SLEWQDQGCS DAGKDSFGYL NGPGSWTGMM NGYGSSTTNP LV

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_027942729.1	0.0	dof zinc finger protein DOF5.6-like
TrEMBL	A0A4D6NPL7	0.0	A0A4D6NPL7_VIGUN; Uncharacterized protein
STRING	XP_007138074.1	0.0	(Phaseolus vulgaris)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G62940.1	2e-55	Dof family protein