PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vun001910
Organism
Vigna unguiculata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family Dof
Protein Properties Length: 333aa    MW: 35601.5 Da    PI: 8.3435
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Vun#S45847247PU_unrefUnigeneView CDS
PUT-167a-Vigna_unguiculata-14476PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof123.47.4e-3963121361
     zf-Dof   3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 
                +++l+cprCds+ntkfCyynny+l+qPr+fCk+CrryWtkGGalrnvP+Ggg+rk+k+s
  Vun001910  63 NQNLRCPRCDSSNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKSKTS 121
                68899***************************************************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
ProDomPD0074788.0E-2662119IPR003851Zinc finger, Dof-type
PfamPF027011.3E-3264120IPR003851Zinc finger, Dof-type
PROSITE profilePS5088429.42266120IPR003851Zinc finger, Dof-type
PROSITE patternPS01361068104IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 333 aa     Download sequence    Send to blast
MIQELFGAAT ASLIAAETKI SINNNGGGLL LTPPAPSSPS PSPSCTTTIT SSANTATSSN  60
SDNQNLRCPR CDSSNTKFCY YNNYNLTQPR HFCKTCRRYW TKGGALRNVP IGGGCRKSKT  120
SGMSSSVAKQ AATKMKAVAS ELGRPQGVLF DQELPQTPIL WGSPQNTQLM ALQELPKNQN  180
PNPNPSSVSI DVKREGNLSG SHSHMVTESL LPNGLLNSTR TGLGYDGVGE FPSLGLCSSF  240
WRNNQNQNQQ QSNGFVLGEQ QNSGVQELYH KFRSSTSVNY CGSDNSPVFL GNMASSSSLS  300
NILESSSVSG SEFGCWNPTL SWCDLPTTSG AYP
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_027912965.10.0dof zinc finger protein DOF2.2-like
TrEMBLA0A4D6LS050.0A0A4D6LS05_VIGUN; Uncharacterized protein
STRINGXP_007156842.11e-179(Phaseolus vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G51700.11e-33DOF zinc finger protein 1