PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vun001965
Organism
Vigna unguiculata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family G2-like
Protein Properties Length: 329aa    MW: 35800.1 Da    PI: 6.8479
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Vun#S45798909PU_unrefUnigeneView CDS
PUT-167a-Vigna_unguiculata-20939PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like107.85.7e-3449103155
    G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                k+rlrWt+eLHerFv+av+qLGG+++AtPk +l++m+v+gLt++hvkSHLQkYRl
  Vun001965  49 KQRLRWTHELHERFVDAVAQLGGPDRATPKGVLRVMGVQGLTIYHVKSHLQKYRL 103
                79****************************************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129414.13446106IPR017930Myb domain
SuperFamilySSF466897.7E-1847103IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.602.2E-3248104IPR009057Homeodomain-like
TIGRFAMsTIGR015571.3E-2549104IPR006447Myb domain, plants
PfamPF002491.3E-951102IPR001005SANT/Myb domain
PfamPF143791.8E-23136182IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 329 aa     Download sequence    Send to blast
MYHSKNVPSA SLVGGNSLVH GQHIDCGGSA MDPGNGGNSH SNNSNLTSKQ RLRWTHELHE  60
RFVDAVAQLG GPDRATPKGV LRVMGVQGLT IYHVKSHLQK YRLAKYLPDS SSDEGKKADK  120
KETGDVLSNL DGSSGMQITE ALKLQMEVQK RLHEQLEVQR QLQLRIEAQG KYLKKIIEEQ  180
QRLSGVLSEA PESGVVAVVP GDVCQEPDNK TDPSTPDPEK AAKDRVPAKS LSIESFSSHH  240
EPLTPDSGCH VGSPADSPKG ERSTKKQRLN MDGSYSKPDM VLPLQILESS MSSYQHPSTV  300
FLGQEQFDPS MGMSTRSGEE LDKVGGSNL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4r_A1e-2349106158Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B1e-2349106158Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C1e-2349106158Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D1e-2349106158Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_027933129.10.0myb family transcription factor PHL7 isoform X1
RefseqXP_027933130.10.0myb family transcription factor PHL7 isoform X1
SwissprotQ9SJW01e-119PHL7_ARATH; Myb family transcription factor PHL7
TrEMBLA0A1S3VJE70.0A0A1S3VJE7_VIGRR; myb family transcription factor PHL7 isoform X1
STRINGGLYMA15G12940.10.0(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01060.11e-104G2-like family protein