PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vun002291
Organism
Vigna unguiculata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family MYB_related
Protein Properties Length: 311aa    MW: 34666.4 Da    PI: 9.6491
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Vun#S45815228PU_unrefUnigeneView CDS
PUT-167a-Vigna_unguiculata-23044PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding30.31e-095898547
                     -HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  5 TteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                     T+ E++++++a +++  + Wk+I + +g  +t  q++s+ qky
        Vun002291 58 TEPEHDKFLEALQLFDRD-WKKIEAFVG-SKTVIQIRSHAQKY 98
                     677*************77.*********.*************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466893.66E-1348104IPR009057Homeodomain-like
PROSITE profilePS5129410.69749103IPR017930Myb domain
TIGRFAMsTIGR015571.3E-1552101IPR006447Myb domain, plants
SMARTSM007171.2E-553101IPR001005SANT/Myb domain
PfamPF002492.3E-75898IPR001005SANT/Myb domain
CDDcd001678.14E-65899No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 311 aa     Download sequence    Send to blast
MVSKNPNPSE AYYMDPSAMS LPGILPFATA TAAADSLEDP AKKTRKPYTI TKSRESRTEP  60
EHDKFLEALQ LFDRDWKKIE AFVGSKTVIQ IRSHAQKYFL KVQKNGTSEH LPPPRPKRKA  120
AHPYPQKASK KCSSALTSIR VLSSSSALLE PGYIMKRDSS AMLKTPIINA AASSWSNNSL  180
QKSTNLLHGH KVNNCCSNSG SPRAKLVGES NGQGNNIHPP RVLPDFGQVY GFIGSVFDPN  240
ESGHLQKLKR MDPIDVETVL LLMRNLSINL VSPDFEDHRR LLASYEVEPE SDNYYINVDR  300
NMLDEQLKSV T
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor. {ECO:0000250}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_027933885.10.0protein REVEILLE 6-like isoform X1
SwissprotQ8H0W31e-115RVE6_ARATH; Protein REVEILLE 6
TrEMBLA0A4D6N5I40.0A0A4D6N5I4_VIGUN; Transcription factor
STRINGXP_007143469.10.0(Phaseolus vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52660.11e-95MYB_related family protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  2. Gray JA,Shalit-Kaneh A,Chu DN,Hsu PY,Harmer SL
    The REVEILLE Clock Genes Inhibit Growth of Juvenile and Adult Plants by Control of Cell Size.
    Plant Physiol., 2017. 173(4): p. 2308-2322
    [PMID:28254761]