PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vun002493
Organism
Vigna unguiculata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family MYB_related
Protein Properties Length: 300aa    MW: 32682.6 Da    PI: 8.4891
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
gnl|UG|Vun#S45967258PU_unrefUnigeneView CDS
PUT-167a-Vigna_unguiculata-12327PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding44.43.7e-1489133347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE++l++ + ++ G+g+W+ I++   k+Rt+ q+ s+ qky
        Vun002493  89 PWTEEEHKLFLVGLQKVGKGDWRGISKNYVKTRTPTQVASHAQKY 133
                      8*******************************************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129418.26282138IPR017930Myb domain
SuperFamilySSF466893.21E-1784139IPR009057Homeodomain-like
TIGRFAMsTIGR015579.7E-1785136IPR006447Myb domain, plants
SMARTSM007173.9E-1086136IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.606.3E-1188133IPR009057Homeodomain-like
CDDcd001678.53E-1089134No hitNo description
PfamPF002496.1E-1289133IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 300 aa     Download sequence    Send to blast
MSRACAATDS VASGEIMLFG VRVVVDSMRK SVSMNNLSQY EHPHDSNNSS NSNNNKKDVL  60
AAADYASADD AVPHNTGRQR ERERKRGVPW TEEEHKLFLV GLQKVGKGDW RGISKNYVKT  120
RTPTQVASHA QKYFLRRSNL NRRRRRSSLF DITTDTVSAI PMEEEQVQNQ DTLSHSQPVC  180
PAVPETNKSG FPMMPVYQFG VGSGVIAVQG GKPLEELTLG QGNIEHNVPI NLVHSIPVVA  240
DPKASTVSDI ITPSSSSAVD PPTLSLGLSF SSDQRQTSSR HSGLHAMPCF SNGDSIISVA
Functional Description ? help Back to Top
Source Description
UniProtBinds selectively to the DNA sequence 5'-[GA]GATAA-3' and may act as a transcription factor involved in the regulation of drought-responsive genes. Enhances stomatal closure in response to abscisic acid (ABA). Confers drought and salt tolerance. {ECO:0000269|PubMed:21030505}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Up-regulated by drought, high salinity, and ABA. {ECO:0000269|PubMed:21030505}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_027912930.10.0transcription factor MYB1R1-like
RefseqXP_027919528.10.0transcription factor MYB1R1-like
RefseqXP_027919592.10.0transcription factor MYB1R1-like
RefseqXP_027919865.10.0transcription factor MYB1R1-like
SwissprotQ2V9B03e-74MY1R1_SOLTU; Transcription factor MYB1R1
TrEMBLA0A4D6KS930.0A0A4D6KS93_VIGUN; Protein MYSM1
STRINGXP_007155372.11e-179(Phaseolus vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G74840.27e-51MYB_related family protein
Publications ? help Back to Top
  1. Shin D, et al.
    Expression of StMYB1R-1, a novel potato single MYB-like domain transcription factor, increases drought tolerance.
    Plant Physiol., 2011. 155(1): p. 421-32
    [PMID:21030505]